Literature DB >> 22572763

Haplotype structure around Bru1 reveals a narrow genetic basis for brown rust resistance in modern sugarcane cultivars.

L Costet1, L Le Cunff, S Royaert, L-M Raboin, C Hervouet, L Toubi, H Telismart, O Garsmeur, Y Rousselle, J Pauquet, S Nibouche, J-C Glaszmann, J-Y Hoarau, A D'Hont.   

Abstract

Modern sugarcane cultivars (Saccharum spp., 2n = 100-130) are high polyploid, aneuploid and of interspecific origin. A major gene (Bru1) conferring resistance to brown rust, caused by the fungus Puccinia melanocephala, has been identified in cultivar R570. We analyzed 380 modern cultivars and breeding materials covering the worldwide diversity with 22 molecular markers genetically linked to Bru1 in R570 within a 8.2 cM segment. Our results revealed a strong LD in the Bru1 region and strong associations between most of the markers and rust resistance. Two PCR markers, that flank the Bru1-bearing segment, were found completely associated with one another and only in resistant clones representing efficient molecular diagnostic for Bru1. On this basis, Bru1 was inferred in 86 % of the 194 resistant sugarcane accessions, revealing that it constitutes the main source of brown rust resistance in modern cultivars. Bru1 PCR diagnostic markers should be particularly useful to identify cultivars with potentially alternative sources of resistance to diversify the basis of brown rust resistance in breeding programs.

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Year:  2012        PMID: 22572763     DOI: 10.1007/s00122-012-1875-x

Source DB:  PubMed          Journal:  Theor Appl Genet        ISSN: 0040-5752            Impact factor:   5.699


  18 in total

1.  Genomic distribution and characterization of EST-derived resistance gene analogs (RGAs) in sugarcane.

Authors:  M Rossi; P G Araujo; F Paulet; O Garsmeur; V M Dias; H Chen; M-A Van Sluys; A D'Hont
Journal:  Mol Genet Genomics       Date:  2003-05-06       Impact factor: 3.291

2.  Simultaneously accounting for population structure, genotype by environment interaction, and spatial variation in marker-trait associations in sugarcane.

Authors:  Xianming Wei; Phillip A Jackson; Scott Hermann; Andrzej Kilian; Katarzyna Heller-Uszynska; Emily Deomano
Journal:  Genome       Date:  2010-11       Impact factor: 2.166

3.  High homologous gene conservation despite extreme autopolyploid redundancy in sugarcane.

Authors:  Olivier Garsmeur; Carine Charron; Stéphanie Bocs; Vincent Jouffe; Sylvie Samain; Arnaud Couloux; Gaëtan Droc; Cyrille Zini; Jean-Christophe Glaszmann; Marie-Anne Van Sluys; Angélique D'Hont
Journal:  New Phytol       Date:  2010-10-29       Impact factor: 10.151

4.  Resistance gene analogues in sugarcane and sorghum and their association with quantitative trait loci for rust resistance.

Authors:  C L McIntyre; R E Casu; J Drenth; D Knight; V A Whan; B J Croft; D R Jordan; J M Manners
Journal:  Genome       Date:  2005-06       Impact factor: 2.166

5.  A new record of Puccinia on sugar-cane in Bombay.

Authors:  M K PATEL; M N KAMAT; Y A PADHYE
Journal:  Curr Sci       Date:  1950-04       Impact factor: 1.102

6.  A putative major gene for rust resistance linked with a RFLP marker in sugarcane cultivar 'R570'.

Authors:  J H Daugrois; L Grivet; D Roques; J Y Hoarau; H Lombard; J C Glaszmann; A D'Hont
Journal:  Theor Appl Genet       Date:  1996-06       Impact factor: 5.699

7.  QTL analysis in a complex autopolyploid: genetic control of sugar content in sugarcane.

Authors:  R Ming; S C Liu; P H Moore; J E Irvine; A H Paterson
Journal:  Genome Res       Date:  2001-12       Impact factor: 9.043

8.  Relationship between sugarcane rust severity and soil properties in louisiana.

Authors:  Richard M Johnson; Michael P Grisham; Edward P Richard
Journal:  Phytopathology       Date:  2007-06       Impact factor: 4.025

9.  Genetic mapping in sugarcane, a high polyploid, using bi-parental progeny: identification of a gene controlling stalk colour and a new rust resistance gene.

Authors:  L-M Raboin; K M Oliveira; L Lecunff; H Telismart; D Roques; M Butterfield; J-Y Hoarau; A D'Hont
Journal:  Theor Appl Genet       Date:  2006-03-22       Impact factor: 5.699

10.  Characterisation of the double genome structure of modern sugarcane cultivars (Saccharum spp.) by molecular cytogenetics.

Authors:  A D'Hont; L Grivet; P Feldmann; S Rao; N Berding; J C Glaszmann
Journal:  Mol Gen Genet       Date:  1996-03-07
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  7 in total

1.  Experimental assessment of the accuracy of genomic selection in sugarcane.

Authors:  M Gouy; Y Rousselle; D Bastianelli; P Lecomte; L Bonnal; D Roques; J-C Efile; S Rocher; J Daugrois; L Toubi; S Nabeneza; C Hervouet; H Telismart; M Denis; A Thong-Chane; J C Glaszmann; J-Y Hoarau; S Nibouche; L Costet
Journal:  Theor Appl Genet       Date:  2013-08-02       Impact factor: 5.699

2.  Characterization of leaf transcriptome, development and utilization of unigenes-derived microsatellite markers in sugarcane (Saccharum sp. hybrid).

Authors:  Mohammad Suhail Khan; Sanjeev Kumar; Ram Kewal Singh; Jyotsnendra Singh; Sanjoy Kumar Duttamajumder; Raman Kapur
Journal:  Physiol Mol Biol Plants       Date:  2018-06-04

3.  Molecular insights into the origin of the brown rust resistance gene Bru1 among Saccharum species.

Authors:  Heng-Bo Wang; Ping-Hua Chen; Yan-Qing Yang; Angelique D'Hont; Yun-Hai Lu
Journal:  Theor Appl Genet       Date:  2017-08-18       Impact factor: 5.699

4.  Full-length enriched cDNA libraries and ORFeome analysis of sugarcane hybrid and ancestor genotypes.

Authors:  Milton Yutaka Nishiyama; Savio Siqueira Ferreira; Pei-Zhong Tang; Scott Becker; Antje Pörtner-Taliana; Glaucia Mendes Souza
Journal:  PLoS One       Date:  2014-09-15       Impact factor: 3.240

5.  Identifying Quantitative Trait Loci (QTLs) and Developing Diagnostic Markers Linked to Orange Rust Resistance in Sugarcane (Saccharum spp.).

Authors:  Xiping Yang; Md S Islam; Sushma Sood; Stephanie Maya; Erik A Hanson; Jack Comstock; Jianping Wang
Journal:  Front Plant Sci       Date:  2018-03-19       Impact factor: 5.753

6.  Identification of Genomic Regions Controlling Leaf Scald Resistance in Sugarcane Using a Bi-parental Mapping Population and Selective Genotyping by Sequencing.

Authors:  Andres F Gutierrez; Jeffrey W Hoy; Collins A Kimbeng; Niranjan Baisakh
Journal:  Front Plant Sci       Date:  2018-06-26       Impact factor: 5.753

7.  Quantitative Trait Loci Mapping and Development of KASP Marker Smut Screening Assay Using High-Density Genetic Map and Bulked Segregant RNA Sequencing in Sugarcane (Saccharum spp.).

Authors:  Yijing Gao; Shan Zhou; Yuxin Huang; Baoqing Zhang; Yuhui Xu; Gemin Zhang; Prakash Lakshmanan; Rongzhong Yang; Hui Zhou; Dongliang Huang; Junxian Liu; Hongwei Tan; Weizhong He; Cuifang Yang; Weixing Duan
Journal:  Front Plant Sci       Date:  2022-01-05       Impact factor: 5.753

  7 in total

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