Literature DB >> 11856036

Expedient solid-phase synthesis of fluorogenic protease substrates using the 7-amino-4-carbamoylmethylcoumarin (ACC) fluorophore.

Dustin J Maly1, Francesco Leonetti, Bradley J Backes, Deborah S Dauber, Jennifer L Harris, Charles S Craik, Jonathan A Ellman.   

Abstract

A highly efficient solid-phase synthesis method for the preparation of fluorogenic protease substrates based upon the bifunctional leaving group 7-amino-4-carbamoylmethylcoumarin (ACC) is reported. Methods for the large-scale preparation of the novel fluorogenic leaving-group ACC are provided (Scheme 1). Detailed procedures are also provided for loading a diverse set of amino acids to support-bound ACC in good yields and with minimal racemization. Finally, procedures are included for the preparative synthesis of optimized ACC substrates for HIV-1 protease and plasmin.

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Year:  2002        PMID: 11856036     DOI: 10.1021/jo016140o

Source DB:  PubMed          Journal:  J Org Chem        ISSN: 0022-3263            Impact factor:   4.354


  41 in total

1.  Altered substrate specificity of drug-resistant human immunodeficiency virus type 1 protease.

Authors:  Deborah S Dauber; Rainer Ziermann; Neil Parkin; Dustin J Maly; Sami Mahrus; Jennifer L Harris; Jon A Ellman; Christos Petropoulos; Charles S Craik
Journal:  J Virol       Date:  2002-02       Impact factor: 5.103

2.  Mechanism and specificity of the human paracaspase MALT1.

Authors:  Janna Hachmann; Scott J Snipas; Bram J van Raam; Erik M Cancino; Emily J Houlihan; Marcin Poreba; Paulina Kasperkiewicz; Marcin Drag; Guy S Salvesen
Journal:  Biochem J       Date:  2012-04-01       Impact factor: 3.857

3.  Substrate mapping and inhibitor profiling of falcipain-2, falcipain-3 and berghepain-2: implications for peptidase anti-malarial drug discovery.

Authors:  Manoj K Ramjee; Nicholas S Flinn; Tracy P Pemberton; Martin Quibell; Yikang Wang; John P Watts
Journal:  Biochem J       Date:  2006-10-01       Impact factor: 3.857

4.  Engineering the substrate and inhibitor specificities of human coagulation Factor VIIa.

Authors:  Katrine S Larsen; Henrik Østergaard; Jais R Bjelke; Ole H Olsen; Hanne B Rasmussen; Leif Christensen; Birthe B Kragelund; Henning R Stennicke
Journal:  Biochem J       Date:  2007-08-01       Impact factor: 3.857

5.  Positional scanning synthetic combinatorial libraries for substrate profiling.

Authors:  Eric L Schneider; Charles S Craik
Journal:  Methods Mol Biol       Date:  2009

Review 6.  Using specificity to strategically target proteases.

Authors:  Mark D Lim; Charles S Craik
Journal:  Bioorg Med Chem       Date:  2008-03-30       Impact factor: 3.641

7.  Design of ultrasensitive probes for human neutrophil elastase through hybrid combinatorial substrate library profiling.

Authors:  Paulina Kasperkiewicz; Marcin Poreba; Scott J Snipas; Heather Parker; Christine C Winterbourn; Guy S Salvesen; Marcin Drag
Journal:  Proc Natl Acad Sci U S A       Date:  2014-02-03       Impact factor: 11.205

Review 8.  Small Molecule Active Site Directed Tools for Studying Human Caspases.

Authors:  Marcin Poreba; Aleksandra Szalek; Paulina Kasperkiewicz; Wioletta Rut; Guy S Salvesen; Marcin Drag
Journal:  Chem Rev       Date:  2015-11-09       Impact factor: 60.622

9.  Multiplexed Probing of Proteolytic Enzymes Using Mass Cytometry-Compatible Activity-Based Probes.

Authors:  Marcin Poreba; Katarzyna M Groborz; Wioletta Rut; Milind Pore; Scott J Snipas; Matej Vizovisek; Boris Turk; Peter Kuhn; Marcin Drag; Guy S Salvesen
Journal:  J Am Chem Soc       Date:  2020-09-15       Impact factor: 15.419

10.  Aminopeptidase fingerprints, an integrated approach for identification of good substrates and optimal inhibitors.

Authors:  Marcin Drag; Matthew Bogyo; Jonathan A Ellman; Guy S Salvesen
Journal:  J Biol Chem       Date:  2009-11-30       Impact factor: 5.157

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