Literature DB >> 11849960

Whole genome amplification--applications and advances.

Trevor L Hawkins1, John C Detter, Paul M Richardson.   

Abstract

The concept of whole genome amplification is something that has arisen in the past few years as the polymerase chain reaction (PCR) has been adapted to replicate regions of genomes that are of biological interest. The applications are many--forensic science, embryonic disease diagnosis, bioterrorism genome detection, "immortalization" of clinical samples, microbial diversity, and genotyping. Several recent papers suggest that whole genomes can be replicated without bias or non-random distribution of the target, these findings open up a new avenue to molecular biology.

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Year:  2002        PMID: 11849960     DOI: 10.1016/s0958-1669(02)00286-0

Source DB:  PubMed          Journal:  Curr Opin Biotechnol        ISSN: 0958-1669            Impact factor:   9.740


  16 in total

1.  Balanced-PCR amplification allows unbiased identification of genomic copy changes in minute cell and tissue samples.

Authors:  Gang Wang; Cameron Brennan; Martha Rook; Jia Liu Wolfe; Christopher Leo; Lynda Chin; Hongjie Pan; Wei-Hua Liu; Brendan Price; G Mike Makrigiorgos
Journal:  Nucleic Acids Res       Date:  2004-05-21       Impact factor: 16.971

2.  Improvement of φ29 DNA polymerase amplification performance by fusion of DNA binding motifs.

Authors:  Miguel de Vega; José M Lázaro; Mario Mencía; Luis Blanco; Margarita Salas
Journal:  Proc Natl Acad Sci U S A       Date:  2010-09-07       Impact factor: 11.205

3.  Multiple displacement amplification, a powerful tool for molecular genetic analysis of powdery mildew fungi.

Authors:  Dolores Fernández-Ortuño; Juan A Torés; Antonio de Vicente; Alejandro Pérez-García
Journal:  Curr Genet       Date:  2007-03       Impact factor: 3.886

Review 4.  Genomic sequencing of uncultured microorganisms from single cells.

Authors:  Roger S Lasken
Journal:  Nat Rev Microbiol       Date:  2012-09       Impact factor: 60.633

5.  Pyrosequence analysis of unamplified and whole genome amplified DNA from hydrocarbon-contaminated groundwater.

Authors:  Nathlee S Abbai; Algasan Govender; Rehana Shaik; Balakrishna Pillay
Journal:  Mol Biotechnol       Date:  2012-01       Impact factor: 2.695

6.  Microbiota of deciduous endodontic infections analysed by MDA and Checkerboard DNA-DNA hybridization.

Authors:  W L F Tavares; L C Neves de Brito; R P Teles; M L A Massara; A P Ribeiro Sobrinho; A D Haffajee; S S Socransky; F R Teles
Journal:  Int Endod J       Date:  2010-11-17       Impact factor: 5.264

7.  Identification of ancient remains through genomic sequencing.

Authors:  Matthew J Blow; Tao Zhang; Tanja Woyke; Camilla F Speller; Andrei Krivoshapkin; Dongya Y Yang; Anatoly Derevianko; Edward M Rubin
Journal:  Genome Res       Date:  2008-04-21       Impact factor: 9.043

8.  Use of microsatellite marker loss of heterozygosity in accurate diagnosis of pancreaticobiliary malignancy from brush cytology samples.

Authors:  A Khalid; R Pal; E Sasatomi; P Swalsky; A Slivka; D Whitcomb; S Finkelstein
Journal:  Gut       Date:  2004-12       Impact factor: 23.059

9.  Assessment of whole genome amplification-induced bias through high-throughput, massively parallel whole genome sequencing.

Authors:  Robert Pinard; Alex de Winter; Gary J Sarkis; Mark B Gerstein; Karrie R Tartaro; Ramona N Plant; Michael Egholm; Jonathan M Rothberg; John H Leamon
Journal:  BMC Genomics       Date:  2006-08-23       Impact factor: 3.969

10.  The complete mitochondrial genome of the enigmatic bigheaded turtle (Platysternon): description of unusual genomic features and the reconciliation of phylogenetic hypotheses based on mitochondrial and nuclear DNA.

Authors:  James F Parham; Chris R Feldman; Jeffrey L Boore
Journal:  BMC Evol Biol       Date:  2006-02-07       Impact factor: 3.260

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