Literature DB >> 11847272

The solution structure of human beta2-microglobulin reveals the prodromes of its amyloid transition.

Giuliana Verdone1, Alessandra Corazza, Paolo Viglino, Fabio Pettirossi, Sofia Giorgetti, Palma Mangione, Alessia Andreola, Monica Stoppini, Vittorio Bellotti, Gennaro Esposito.   

Abstract

The solution structure of human beta2-microglobulin (beta2-m), the nonpolymorphic component of class I major histocompatibility complex (MHC-I), was determined by (1)H NMR spectroscopy and restrained modeling calculations. Compared to previous structural data obtained from the NMR secondary structure of the isolated protein and the crystal structure of MHC-I, in which the protein is associated to the heavy-chain component, several differences are observed. The most important rearrangements were observed for (1) strands V and VI (loss of the C-terminal and N-terminal end, respectively), (2) interstrand loop V-VI, and (3) strand I, including the N-terminal segment (displacement outward of the molecular core). These modifications can be considered as the prodromes of the amyloid transition. Solvation of the protected regions in MHC-I decreases the tertiary packing by breaking the contiguity of the surface hydrophobic patches at the interface with heavy chain and the nearby region at the surface charge cluster of the C-terminal segment. As a result, the molecule is placed in a state in which even minor charge and solvation changes in response to pH or ionic-strength variations can easily compromise the hydrophobic/hydrophilic balance and trigger the transition into a partially unfolded intermediate that starts with unpairing of strand I and leads to polymerization and precipitation into fibrils or amorphous aggregates. The same mechanism accounts for the partial unfolding and fiber formation subsequent to Cu(2+) binding, which is shown to occur primarily at His 31 and involve partially also His 13, the next available His residue along the partial unfolding pathway.

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Year:  2002        PMID: 11847272      PMCID: PMC2373469          DOI: 10.1110/ps.29002

Source DB:  PubMed          Journal:  Protein Sci        ISSN: 0961-8368            Impact factor:   6.725


  34 in total

1.  A new form of amyloid protein associated with chronic hemodialysis was identified as beta 2-microglobulin.

Authors:  F Gejyo; T Yamada; S Odani; Y Nakagawa; M Arakawa; T Kunitomo; H Kataoka; M Suzuki; Y Hirasawa; T Shirahama
Journal:  Biochem Biophys Res Commun       Date:  1985-06-28       Impact factor: 3.575

2.  Structure of the human class I histocompatibility antigen, HLA-A2.

Authors:  P J Bjorkman; M A Saper; B Samraoui; W S Bennett; J L Strominger; D C Wiley
Journal:  Nature       Date:  1987 Oct 8-14       Impact factor: 49.962

3.  Dictionary of protein secondary structure: pattern recognition of hydrogen-bonded and geometrical features.

Authors:  W Kabsch; C Sander
Journal:  Biopolymers       Date:  1983-12       Impact factor: 2.505

4.  Three-dimensional structure of beta 2-microglobulin.

Authors:  J W Becker; G N Reeke
Journal:  Proc Natl Acad Sci U S A       Date:  1985-06       Impact factor: 11.205

5.  Kidney dialysis-associated amyloidosis: a molecular role for copper in fiber formation.

Authors:  C J Morgan; M Gelfand; C Atreya; A D Miranker
Journal:  J Mol Biol       Date:  2001-06-01       Impact factor: 5.469

6.  Beta 2-microglobulin, different fragments and polymers thereof in synovial amyloid in long-term hemodialysis.

Authors:  R P Linke; H Hampl; S Bartel-Schwarze; M Eulitz
Journal:  Biol Chem Hoppe Seyler       Date:  1987-02

7.  In vitro formation of amyloid fibrils from intact beta 2-microglobulin.

Authors:  L H Connors; T Shirahama; M Skinner; A Fenves; A S Cohen
Journal:  Biochem Biophys Res Commun       Date:  1985-09-30       Impact factor: 3.575

8.  High-resolution 1H NMR study of the solution structure of alamethicin.

Authors:  G Esposito; J A Carver; J Boyd; I D Campbell
Journal:  Biochemistry       Date:  1987-02-24       Impact factor: 3.162

9.  Removal of the N-terminal hexapeptide from human beta2-microglobulin facilitates protein aggregation and fibril formation.

Authors:  G Esposito; R Michelutti; G Verdone; P Viglino; H Hernández; C V Robinson; A Amoresano; F Dal Piaz; M Monti; P Pucci; P Mangione; M Stoppini; G Merlini; G Ferri; V Bellotti
Journal:  Protein Sci       Date:  2000-05       Impact factor: 6.725

10.  Detection of two partially structured species in the folding process of the amyloidogenic protein beta 2-microglobulin.

Authors:  F Chiti; P Mangione; A Andreola; S Giorgetti; M Stefani; C M Dobson; V Bellotti; N Taddei
Journal:  J Mol Biol       Date:  2001-03-16       Impact factor: 5.469

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  51 in total

1.  Proteins with H-bond packing defects are highly interactive with lipid bilayers: Implications for amyloidogenesis.

Authors:  Ariel Fernández; R Stephen Berry
Journal:  Proc Natl Acad Sci U S A       Date:  2003-02-18       Impact factor: 11.205

2.  Structural defects and the diagnosis of amyloidogenic propensity.

Authors:  Ariel Fernández; József Kardos; L Ridgway Scott; Yuji Goto; R Stephen Berry
Journal:  Proc Natl Acad Sci U S A       Date:  2003-05-12       Impact factor: 11.205

3.  Simulation of pH-dependent edge strand rearrangement in human beta-2 microglobulin.

Authors:  Sheldon Park; Jeffery G Saven
Journal:  Protein Sci       Date:  2005-12-01       Impact factor: 6.725

Review 4.  Amyloid formation by globular proteins under native conditions.

Authors:  Fabrizio Chiti; Christopher M Dobson
Journal:  Nat Chem Biol       Date:  2009-01       Impact factor: 15.040

5.  Thermally induced denaturation and aggregation of BLG-A: effect of the Cu(2+) and Zn (2+) metal ions.

Authors:  A Stirpe; B Rizzuti; M Pantusa; R Bartucci; L Sportelli; R Guzzi
Journal:  Eur Biophys J       Date:  2008-06-17       Impact factor: 1.733

6.  Dynamics of free versus complexed β2-microglobulin and the evolution of interfaces in MHC class I molecules.

Authors:  Chee-Seng Hee; Monika Beerbaum; Bernhard Loll; Martin Ballaschk; Peter Schmieder; Barbara Uchanska-Ziegler; Andreas Ziegler
Journal:  Immunogenetics       Date:  2012-12-11       Impact factor: 2.846

7.  Structure of the preamyloid dimer of beta-2-microglobulin from covalent labeling and mass spectrometry.

Authors:  Vanessa Leah Mendoza; Kwasi Antwi; Mario A Barón-Rodríguez; Cristian Blanco; Richard W Vachet
Journal:  Biochemistry       Date:  2010-02-23       Impact factor: 3.162

8.  Delineating the conformational elements responsible for Cu(2+)-induced oligomerization of beta-2 microglobulin.

Authors:  Dorottya V Blaho; Andrew D Miranker
Journal:  Biochemistry       Date:  2009-07-21       Impact factor: 3.162

9.  Intermolecular alignment in β2-microglobulin amyloid fibrils.

Authors:  Galia T Debelouchina; Geoffrey W Platt; Marvin J Bayro; Sheena E Radford; Robert G Griffin
Journal:  J Am Chem Soc       Date:  2010-11-15       Impact factor: 15.419

10.  A regulatable switch mediates self-association in an immunoglobulin fold.

Authors:  Matthew F Calabrese; Catherine M Eakin; Jimin M Wang; Andrew D Miranker
Journal:  Nat Struct Mol Biol       Date:  2008-09       Impact factor: 15.369

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