Literature DB >> 11846590

NMR determination of the torsion angle psi in alpha-helical peptides and proteins: the HCCN dipolar correlation experiment.

Vladimir Ladizhansky1, Mikhail Veshtort, Robert G Griffin.   

Abstract

Several existing methods permit measurement of the torsion angles phi, psi and chi in peptides and proteins with solid-state MAS NMR experiments. Currently, however, there is not an approach that is applicable to measurement of psi in the angular range -20 degree to -70 degree, commonly found in alpha-helical structures. Accordingly, we have developed a HCCN dipolar correlation MAS experiment that is sensitive and accurate in this regime. An initial REDOR driven (13)C'--(15)N dipolar evolution period is followed by the C' to C(alpha) polarization transfer and by Lee--Goldburg cross polarization recoupling of the (13)C(alpha)(1)H dipolar interaction. The difference between the effective (13)C(1)H and (13)C(15)N dipolar interaction strengths is balanced out by incrementing the (13)C--(15)N dipolar evolution period in steps that are a factor of R(R approximately omega(CH)/omega(CN)) larger than the (13)C--(1)H steps. The resulting dephasing curves are sensitive to variations in psi in the angular region associated with alpha-helical secondary structure. To demonstrate the validity of the technique, we apply it to N-formyl-[U-(13)C,(15)N] Met-Leu-Phe-OH (MLF). The value of psi extracted is consistent with the previous NMR measurements and close to that reported in diffraction studies for the methyl ester of MLF, N-formyl-[U-(13)C,(15)N]Met-Leu-Phe-OMe. (C) 2002 Elsevier Science (USA).

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Year:  2002        PMID: 11846590     DOI: 10.1006/jmre.2001.2488

Source DB:  PubMed          Journal:  J Magn Reson        ISSN: 1090-7807            Impact factor:   2.229


  11 in total

1.  De novo determination of peptide structure with solid-state magic-angle spinning NMR spectroscopy.

Authors:  Chad M Rienstra; Lisa Tucker-Kellogg; Christopher P Jaroniec; Morten Hohwy; Bernd Reif; Michael T McMahon; Bruce Tidor; Tomas Lozano-Pérez; Robert G Griffin
Journal:  Proc Natl Acad Sci U S A       Date:  2002-07-29       Impact factor: 11.205

Review 2.  Recent developments in solid-state magic-angle spinning, nuclear magnetic resonance of fully and significantly isotopically labelled peptides and proteins.

Authors:  Suzana K Straus
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2004-06-29       Impact factor: 6.237

3.  Peptide bond conformation in peptides and proteins probed by dipolar coupling-chemical shift tensor correlation solid-state NMR.

Authors:  Dwaipayan Mukhopadhyay; Chitrak Gupta; Theint Theint; Christopher P Jaroniec
Journal:  J Magn Reson       Date:  2018-10-30       Impact factor: 2.229

Review 4.  Solid-state NMR as a probe of amyloid structure.

Authors:  Robert Tycko
Journal:  Protein Pept Lett       Date:  2006       Impact factor: 1.890

5.  Dynamic nuclear polarization at 9T using a novel 250GHz gyrotron microwave source.

Authors:  V S Bajaj; C T Farrar; M K Hornstein; I Mastovsky; J Vieregg; J Bryant; B Eléna; K E Kreischer; R J Temkin; R G Griffin
Journal:  J Magn Reson       Date:  2003-02       Impact factor: 2.229

6.  Frequency-selective REDOR and spin-diffusion relays in uniformly labeled whole cells.

Authors:  David M Rice; Joseph A H Romaniuk; Lynette Cegelski
Journal:  Solid State Nucl Magn Reson       Date:  2015-10-14       Impact factor: 2.293

7.  Dipole tensor-based atomic-resolution structure determination of a nanocrystalline protein by solid-state NMR.

Authors:  W Trent Franks; Benjamin J Wylie; Heather L Frericks Schmidt; Andrew J Nieuwkoop; Rebecca-Maria Mayrhofer; Gautam J Shah; Daniel T Graesser; Chad M Rienstra
Journal:  Proc Natl Acad Sci U S A       Date:  2008-03-14       Impact factor: 11.205

8.  Proton assisted recoupling and protein structure determination.

Authors:  Gaël De Paëpe; Józef R Lewandowski; Antoine Loquet; Anja Böckmann; Robert G Griffin
Journal:  J Chem Phys       Date:  2008-12-28       Impact factor: 3.488

9.  Observation of a low-temperature, dynamically driven structural transition in a polypeptide by solid-state NMR spectroscopy.

Authors:  Vikram S Bajaj; Patrick C A van der Wel; Robert G Griffin
Journal:  J Am Chem Soc       Date:  2009-01-14       Impact factor: 15.419

10.  (15)N-(15)N proton assisted recoupling in magic angle spinning NMR.

Authors:  Józef R Lewandowski; Gaël De Paëpe; Matthew T Eddy; Robert G Griffin
Journal:  J Am Chem Soc       Date:  2009-04-29       Impact factor: 15.419

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