Literature DB >> 20395293

Nitric oxide binds to the proximal heme coordination site of the ferrocytochrome c/cardiolipin complex: formation mechanism and dynamics.

Gary Silkstone1, Sofia M Kapetanaki, Ivan Husu, Marten H Vos, Michael T Wilson.   

Abstract

Mammalian mitochondrial cytochrome c interacts with cardiolipin to form a complex (cyt. c/CL) important in apoptosis. Here we show that this interaction leads to structural changes in ferrocytochrome c that leads to an open coordinate site on the central iron, resulting from the dissociation of the intrinsic methionine residue, where NO can rapidly bind (k = 1.2 x 10(7) m(-1) s(-1)). Accompanying NO binding, the proximal histidine dissociates leaving the heme pentacoordinate, in contrast to the hexacoordinate nitrosyl adducts of native ferrocytochrome c or of the protein in which the coordinating methionine is removed by chemical modification or mutation. We present the results of stopped-flow and photolysis experiments that show that following initial NO binding to the heme, there ensues an unusually complex set of kinetic steps. The spectral changes associated with these kinetic transitions, together with their dependence on NO concentration, have been determined and lead us to conclude that NO binding to cyt. c/CL takes place via an overall scheme comparable to that described for cytochrome c' and guanylate cyclase, the final product being one in which NO resides on the proximal side of the heme. In addition, novel features not observed before in other heme proteins forming pentacoordinate nitrosyl species, include a high yield of NO escape after dissociation, rapid (<1 ms) dissociation of proximal histidine upon NO binding and its very fast binding (60 ps) after NO dissociation, and the formation of a hexacoordinate intermediate. These features all point at a remarkable mobility of the proximal heme environment induced by cardiolipin.

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Year:  2010        PMID: 20395293      PMCID: PMC2888389          DOI: 10.1074/jbc.M109.067736

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  37 in total

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Authors:  Joan B Mannick; Christopher M Schonhoff
Journal:  Free Radic Res       Date:  2004-01

Review 2.  Mitochondrial nitric oxide synthase.

Authors:  Pedram Ghafourifar; Enrique Cadenas
Journal:  Trends Pharmacol Sci       Date:  2005-04       Impact factor: 14.819

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4.  Single cell microspectroscopy reveals that erythrocytes containing hemoglobin S retain a 'memory' of previous sickling cycles.

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Journal:  FEBS Lett       Date:  1988-08-15       Impact factor: 4.124

5.  Kinetics of the reaction with CO of human erythrocytes. Observations by single cell spectroscopy.

Authors:  E Antonini; M Brunori; B Giardina; P A Benedetti; G Bianchini; S Grassi
Journal:  FEBS Lett       Date:  1978-02-15       Impact factor: 4.124

6.  Nitric oxide, cytochrome c oxidase and myoglobin: competition and reaction pathways.

Authors:  Alessandro Giuffrè; Elena Forte; Maurizio Brunori; Paolo Sarti
Journal:  FEBS Lett       Date:  2005-04-25       Impact factor: 4.124

7.  Photophysics and reactivity of heme proteins: a femtosecond absorption study of hemoglobin, myoglobin, and protoheme.

Authors:  J W Petrich; C Poyart; J L Martin
Journal:  Biochemistry       Date:  1988-05-31       Impact factor: 3.162

Review 8.  Mitochondrial nitric-oxide synthase: enzyme expression, characterization, and regulation.

Authors:  Virginia Haynes; Sarah Elfering; Nathaniel Traaseth; Cecilia Giulivi
Journal:  J Bioenerg Biomembr       Date:  2004-08       Impact factor: 2.945

9.  Nitric oxide regulation of superoxide and peroxynitrite-dependent lipid peroxidation. Formation of novel nitrogen-containing oxidized lipid derivatives.

Authors:  H Rubbo; R Radi; M Trujillo; R Telleri; B Kalyanaraman; S Barnes; M Kirk; B A Freeman
Journal:  J Biol Chem       Date:  1994-10-21       Impact factor: 5.157

10.  Soluble guanylate cyclase from bovine lung: activation with nitric oxide and carbon monoxide and spectral characterization of the ferrous and ferric states.

Authors:  J R Stone; M A Marletta
Journal:  Biochemistry       Date:  1994-05-10       Impact factor: 3.162

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  14 in total

1.  Reductive nitrosylation of ferric microperoxidase-11.

Authors:  Paolo Ascenzi; Giovanna De Simone; Diego Sbardella; Massimo Coletta
Journal:  J Biol Inorg Chem       Date:  2018-11-02       Impact factor: 3.358

2.  Dynamics of the heme-binding bacterial gas-sensing dissimilative nitrate respiration regulator (DNR) and activation barriers for ligand binding and escape.

Authors:  Laura Lobato; Latifa Bouzhir-Sima; Taku Yamashita; Michael T Wilson; Marten H Vos; Ursula Liebl
Journal:  J Biol Chem       Date:  2014-07-18       Impact factor: 5.157

3.  Hydrogen bonding of the dissociated histidine ligand is not required for formation of a proximal NO adduct in cytochrome c'.

Authors:  Dlzar D Ghafoor; Demet Kekilli; Gaylany H Abdullah; Florian S N Dworkowski; Hamid G Hassan; Michael T Wilson; Richard W Strange; Michael A Hough
Journal:  J Biol Inorg Chem       Date:  2015-06-23       Impact factor: 3.358

4.  The nitrite reductase activity of horse heart carboxymethylated-cytochrome c is modulated by cardiolipin.

Authors:  Paolo Ascenzi; Diego Sbardella; Federica Sinibaldi; Roberto Santucci; Massimo Coletta
Journal:  J Biol Inorg Chem       Date:  2016-03-24       Impact factor: 3.358

5.  Conformational control of the binding of diatomic gases to cytochrome c'.

Authors:  Andreea Manole; Demet Kekilli; Dimitri A Svistunenko; Michael T Wilson; Paul S Dobbin; Michael A Hough
Journal:  J Biol Inorg Chem       Date:  2015-03-20       Impact factor: 3.358

Review 6.  Carbon Monoxide Signaling: Examining Its Engagement with Various Molecular Targets in the Context of Binding Affinity, Concentration, and Biologic Response.

Authors:  Zhengnan Yuan; Ladie Kimberly De La Cruz; Xiaoxiao Yang; Binghe Wang
Journal:  Pharmacol Rev       Date:  2022-07       Impact factor: 18.923

7.  Cardiolipin modulates allosterically the nitrite reductase activity of horse heart cytochrome c.

Authors:  Paolo Ascenzi; Maria Marino; Fabio Polticelli; Roberto Santucci; Massimo Coletta
Journal:  J Biol Inorg Chem       Date:  2014-06-27       Impact factor: 3.358

8.  Ferric nitrosylated myoglobin catalyzes peroxynitrite scavenging.

Authors:  Paolo Ascenzi; Giovanna De Simone; Grazia R Tundo; Carlos Platas-Iglesias; Massimiliano Coletta
Journal:  J Biol Inorg Chem       Date:  2020-03-14       Impact factor: 3.358

9.  Cyanide binding to ferrous and ferric microperoxidase-11.

Authors:  Paolo Ascenzi; Diego Sbardella; Roberto Santucci; Massimo Coletta
Journal:  J Biol Inorg Chem       Date:  2016-05-26       Impact factor: 3.358

10.  Nitrogen dioxide oxidizes mitochondrial cytochrome c.

Authors:  Rebecca S Silkstone; Maria G Mason; Peter Nicholls; Chris E Cooper
Journal:  Free Radic Biol Med       Date:  2011-11-17       Impact factor: 7.376

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