Literature DB >> 11839304

Structural evidence for ammonia tunneling across the (beta alpha)(8) barrel of the imidazole glycerol phosphate synthase bienzyme complex.

Alice Douangamath1, Martina Walker, Silke Beismann-Driemeyer, M Cristina Vega-Fernandez, Reinhard Sterner, Matthias Wilmanns.   

Abstract

Since reactive ammonia is not available under physiological conditions, glutamine is used as a source for the incorporation of nitrogen in a number of metabolic pathway intermediates. The heterodimeric ImGP synthase that links histidine and purine biosynthesis belongs to the family of glutamine amidotransferases in which the glutaminase activity is coupled with a subsequent synthase activity specific for each member of the enzyme family. Its X-ray structure from the hyperthermophile Thermotoga maritima shows that the glutaminase subunit is associated with the N-terminal face of the (beta alpha)(8) barrel cyclase subunit. The complex reveals a putative tunnel for the transfer of ammonia over a distance of 25 A. Although ammonia tunneling has been reported for glutamine amidotransferases, the ImGP synthase has evolved a novel mechanism, which extends the known functional properties of the versatile (beta alpha)(8) barrel fold.

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Year:  2002        PMID: 11839304     DOI: 10.1016/s0969-2126(02)00702-5

Source DB:  PubMed          Journal:  Structure        ISSN: 0969-2126            Impact factor:   5.006


  47 in total

1.  Developing an energy landscape for the novel function of a (beta/alpha)8 barrel: ammonia conduction through HisF.

Authors:  Rommie Amaro; Emad Tajkhorshid; Zaida Luthey-Schulten
Journal:  Proc Natl Acad Sci U S A       Date:  2003-06-10       Impact factor: 11.205

2.  Identification of genes involved in the acetamidino group modification of the flagellin N-linked glycan of Methanococcus maripaludis.

Authors:  Gareth M Jones; John Wu; Yan Ding; Kaoru Uchida; Shin-Ichi Aizawa; Anna Robotham; Susan M Logan; John Kelly; Ken F Jarrell
Journal:  J Bacteriol       Date:  2012-03-09       Impact factor: 3.490

3.  Structural analysis of two enzymes catalysing reverse metabolic reactions implies common ancestry.

Authors:  Olga Mayans; Andreas Ivens; L Johan Nissen; Kasper Kirschner; Matthias Wilmanns
Journal:  EMBO J       Date:  2002-07-01       Impact factor: 11.598

Review 4.  Contribution of structural genomics to understanding the biology of Escherichia coli.

Authors:  Allan Matte; J Sivaraman; Irena Ekiel; Kalle Gehring; Zongchao Jia; Miroslaw Cygler
Journal:  J Bacteriol       Date:  2003-07       Impact factor: 3.490

Review 5.  Solution NMR Spectroscopy for the Study of Enzyme Allostery.

Authors:  George P Lisi; J Patrick Loria
Journal:  Chem Rev       Date:  2016-01-06       Impact factor: 60.622

Review 6.  Protein Allostery and Conformational Dynamics.

Authors:  Jingjing Guo; Huan-Xiang Zhou
Journal:  Chem Rev       Date:  2016-02-15       Impact factor: 60.622

7.  Mimicking enzyme evolution by generating new (betaalpha)8-barrels from (betaalpha)4-half-barrels.

Authors:  Birte Höcker; Jörg Claren; Reinhard Sterner
Journal:  Proc Natl Acad Sci U S A       Date:  2004-11-11       Impact factor: 11.205

8.  Structural elements in IGP synthase exclude water to optimize ammonia transfer.

Authors:  Rommie E Amaro; Rebecca S Myers; V Jo Davisson; Zaida A Luthey-Schulten
Journal:  Biophys J       Date:  2005-04-22       Impact factor: 4.033

Review 9.  Structure-function studies on the complex iron-sulfur flavoprotein glutamate synthase: the key enzyme of ammonia assimilation.

Authors:  Maria A Vanoni; Laura Dossena; Robert H H van den Heuvel; Bruno Curti
Journal:  Photosynth Res       Date:  2005       Impact factor: 3.573

10.  Mutation analysis of carbamoyl phosphate synthetase: does the structurally conserved glutamine amidotransferase triad act as a functional dyad?

Authors:  Emily J Hart; Susan G Powers-Lee
Journal:  Protein Sci       Date:  2008-05-05       Impact factor: 6.725

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