Literature DB >> 12837772

Contribution of structural genomics to understanding the biology of Escherichia coli.

Allan Matte1, J Sivaraman, Irena Ekiel, Kalle Gehring, Zongchao Jia, Miroslaw Cygler.   

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Year:  2003        PMID: 12837772      PMCID: PMC164895          DOI: 10.1128/JB.185.14.3994-4002.2003

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


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  80 in total

1.  The Protein Data Bank.

Authors:  H M Berman; J Westbrook; Z Feng; G Gilliland; T N Bhat; H Weissig; I N Shindyalov; P E Bourne
Journal:  Nucleic Acids Res       Date:  2000-01-01       Impact factor: 16.971

2.  RNA expression analysis using a 30 base pair resolution Escherichia coli genome array.

Authors:  D W Selinger; K J Cheung; R Mei; E M Johansson; C S Richmond; F R Blattner; D J Lockhart; G M Church
Journal:  Nat Biotechnol       Date:  2000-12       Impact factor: 54.908

3.  Chips off the old block.

Authors:  Eugene G Mueller
Journal:  Nat Struct Biol       Date:  2002-05

4.  Enlarged FAMSBASE: protein 3D structure models of genome sequences for 41 species.

Authors:  Akihiro Yamaguchi; Mitsuo Iwadate; Ei-ichiro Suzuki; Kei Yura; Shigetsugu Kawakita; Hideaki Umeyama; Mitiko Go
Journal:  Nucleic Acids Res       Date:  2003-01-01       Impact factor: 16.971

Review 5.  Comparing the predicted and observed properties of proteins encoded in the genome of Escherichia coli K-12.

Authors:  A J Link; K Robison; G M Church
Journal:  Electrophoresis       Date:  1997-08       Impact factor: 3.535

6.  Genome sequence of enterohaemorrhagic Escherichia coli O157:H7.

Authors:  N T Perna; G Plunkett; V Burland; B Mau; J D Glasner; D J Rose; G F Mayhew; P S Evans; J Gregor; H A Kirkpatrick; G Pósfai; J Hackett; S Klink; A Boutin; Y Shao; L Miller; E J Grotbeck; N W Davis; A Lim; E T Dimalanta; K D Potamousis; J Apodaca; T S Anantharaman; J Lin; G Yen; D C Schwartz; R A Welch; F R Blattner
Journal:  Nature       Date:  2001-01-25       Impact factor: 49.962

7.  Functional genomics: expression analysis of Escherichia coli growing on minimal and rich media.

Authors:  H Tao; C Bausch; C Richmond; F R Blattner; T Conway
Journal:  J Bacteriol       Date:  1999-10       Impact factor: 3.490

8.  Imidazole glycerol phosphate synthase: the glutamine amidotransferase in histidine biosynthesis.

Authors:  T J Klem; V J Davisson
Journal:  Biochemistry       Date:  1993-05-18       Impact factor: 3.162

9.  Genetic analysis of the dTDP-rhamnose biosynthesis region of the Escherichia coli VW187 (O7:K1) rfb gene cluster: identification of functional homologs of rfbB and rfbA in the rff cluster and correct location of the rffE gene.

Authors:  C L Marolda; M A Valvano
Journal:  J Bacteriol       Date:  1995-10       Impact factor: 3.490

10.  A functional update of the Escherichia coli K-12 genome.

Authors:  M H Serres; S Gopal; L A Nahum; P Liang; T Gaasterland; M Riley
Journal:  Genome Biol       Date:  2001-08-20       Impact factor: 13.583

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  2 in total

1.  Targeting the human cancer pathway protein interaction network by structural genomics.

Authors:  Yuanpeng Janet Huang; Dehua Hang; Long Jason Lu; Liang Tong; Mark B Gerstein; Gaetano T Montelione
Journal:  Mol Cell Proteomics       Date:  2008-05-18       Impact factor: 5.911

Review 2.  From protein sequences to 3D-structures and beyond: the example of the UniProt knowledgebase.

Authors:  Ursula Hinz
Journal:  Cell Mol Life Sci       Date:  2009-12-31       Impact factor: 9.261

  2 in total

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