Literature DB >> 11809895

Efficient polyadenylation of Rous sarcoma virus RNA requires the negative regulator of splicing element.

Brent L Fogel1, Lisa M McNally, Mark T McNally.   

Abstract

Rous sarcoma virus pre-mRNA contains an element known as the negative regulator of splicing (NRS) that acts to inhibit viral RNA splicing. The NRS binds serine/arginine-rich (SR) proteins, hnRNP H and the U1/U11 snRNPs, and appears to inhibit splicing by acting as a decoy 5' splice site. Deletions within the gag gene that encompass the NRS also lead to increased read-through past the viral polyadenylation site, suggesting a role for the NRS in promoting polyadenylation. Using NRS-specific deletions and mutations, we show here that a polyadenylation stimulatory activity maps directly to the NRS and is most likely dependent upon SR proteins and U1 and/or U11 snRNP. hnRNP H does not appear to mediate splicing control or stimulate RSV polyadenylation, since viral RNAs containing hnRNP H-specific mutations were spliced and polyadenylated normally. However, the ability of hnRNP H mutations to suppress the read-through caused by an SR protein mutation suggests the potential for hnRNP H to antagonize polyadenylation. Interestingly, disruption of splicing control closely correlated with increased read-through, indicating that a functional NRS is necessary for efficient RSV polyadenylation rather than binding of an individual factor. We propose a model in which the NRS serves to enhance polyadenylation of RSV unspliced RNA in a process analogous to the stimulation of cellular pre-mRNA polyadenylation by splicing complexes.

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Year:  2002        PMID: 11809895      PMCID: PMC100303          DOI: 10.1093/nar/30.3.810

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  48 in total

Review 1.  SR proteins and splicing control.

Authors:  J L Manley; R Tacke
Journal:  Genes Dev       Date:  1996-07-01       Impact factor: 11.361

2.  A novel spliceosome containing U11, U12, and U5 snRNPs excises a minor class (AT-AC) intron in vitro.

Authors:  W Y Tarn; J A Steitz
Journal:  Cell       Date:  1996-03-08       Impact factor: 41.582

Review 3.  The superfamily of arginine/serine-rich splicing factors.

Authors:  X D Fu
Journal:  RNA       Date:  1995-09       Impact factor: 4.942

Review 4.  Finding splice sites within a wilderness of RNA.

Authors:  D L Black
Journal:  RNA       Date:  1995-10       Impact factor: 4.942

Review 5.  Exon recognition in vertebrate splicing.

Authors:  S M Berget
Journal:  J Biol Chem       Date:  1995-02-10       Impact factor: 5.157

6.  Direct interaction of the U1 snRNP-A protein with the upstream efficiency element of the SV40 late polyadenylation signal.

Authors:  C S Lutz; J C Alwine
Journal:  Genes Dev       Date:  1994-03-01       Impact factor: 11.361

7.  A suboptimal src 3' splice site is necessary for efficient replication of Rous sarcoma virus.

Authors:  L Zhang; C M Stoltzfus
Journal:  Virology       Date:  1995-02-01       Impact factor: 3.616

8.  SR protein splicing factors interact with the Rous sarcoma virus negative regulator of splicing element.

Authors:  L M McNally; M T McNally
Journal:  J Virol       Date:  1996-02       Impact factor: 5.103

9.  The hnRNP F protein: unique primary structure, nucleic acid-binding properties, and subcellular localization.

Authors:  M J Matunis; J Xing; G Dreyfuss
Journal:  Nucleic Acids Res       Date:  1994-03-25       Impact factor: 16.971

10.  Heterogeneous nuclear ribonucleoproteins H, H', and F are members of a ubiquitously expressed subfamily of related but distinct proteins encoded by genes mapping to different chromosomes.

Authors:  B Honoré; H H Rasmussen; H Vorum; K Dejgaard; X Liu; P Gromov; P Madsen; B Gesser; N Tommerup; J E Celis
Journal:  J Biol Chem       Date:  1995-12-01       Impact factor: 5.157

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  14 in total

1.  The negative regulator of splicing element of Rous sarcoma virus promotes polyadenylation.

Authors:  Jeremy E Wilusz; Karen L Beemon
Journal:  J Virol       Date:  2006-10       Impact factor: 5.103

2.  Serine/arginine-rich proteins contribute to negative regulator of splicing element-stimulated polyadenylation in rous sarcoma virus.

Authors:  Nicole L Maciolek; Mark T McNally
Journal:  J Virol       Date:  2007-08-01       Impact factor: 5.103

Review 3.  RNA processing control in avian retroviruses.

Authors:  Mark T McNally
Journal:  Front Biosci       Date:  2008-05-01

Review 4.  Stress proteins: the biological functions in virus infection, present and challenges for target-based antiviral drug development.

Authors:  Qianya Wan; Dan Song; Huangcan Li; Ming-Liang He
Journal:  Signal Transduct Target Ther       Date:  2020-07-13

5.  A downstream polyadenylation element in human papillomavirus type 16 L2 encodes multiple GGG motifs and interacts with hnRNP H.

Authors:  Daniel Oberg; Joanna Fay; Helen Lambkin; Stefan Schwartz
Journal:  J Virol       Date:  2005-07       Impact factor: 5.103

6.  Evidence that a threshold of serine/arginine-rich (SR) proteins recruits CFIm to promote rous sarcoma virus mRNA 3' end formation.

Authors:  Stephen W Hudson; Lisa M McNally; Mark T McNally
Journal:  Virology       Date:  2016-09-04       Impact factor: 3.616

7.  Juxtaposition of two distant, serine-arginine-rich protein-binding elements is required for optimal polyadenylation in Rous sarcoma virus.

Authors:  Stephen W Hudson; Mark T McNally
Journal:  J Virol       Date:  2011-08-17       Impact factor: 5.103

Review 8.  Downstream elements of mammalian pre-mRNA polyadenylation signals: primary, secondary and higher-order structures.

Authors:  Margarita I Zarudnaya; Iryna M Kolomiets; Andriy L Potyahaylo; Dmytro M Hovorun
Journal:  Nucleic Acids Res       Date:  2003-03-01       Impact factor: 16.971

9.  Silent point mutation in an avian retrovirus RNA processing element promotes c-myb-associated short-latency lymphomas.

Authors:  Tatjana S Polony; Sandra J Bowers; Paul E Neiman; Karen L Beemon
Journal:  J Virol       Date:  2003-09       Impact factor: 5.103

10.  Characterization of Rous sarcoma virus polyadenylation site use in vitro.

Authors:  Nicole L Maciolek; Mark T McNally
Journal:  Virology       Date:  2008-02-13       Impact factor: 3.616

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