Literature DB >> 27596537

Evidence that a threshold of serine/arginine-rich (SR) proteins recruits CFIm to promote rous sarcoma virus mRNA 3' end formation.

Stephen W Hudson1, Lisa M McNally1, Mark T McNally2.   

Abstract

The weak polyadenylation site (PAS) of Rous sarcoma virus (RSV) is activated by the juxtaposition of SR protein binding sites within the spatially separate negative regulator of splicing (NRS) element and the env RNA splicing enhancer (Env enhancer), which are far upstream of the PAS. Juxtaposition occurs by formation of the NRS - 3' ss splicing regulatory complex and is thought to provide a threshold of SR proteins that facilitate long-range stimulation of the PAS. We provide evidence for the threshold model by showing that greater than three synthetic SR protein binding sites are needed to substitute for the Env enhancer, that either the NRS or Env enhancer alone promotes polyadenylation when the distance to the PAS is decreased, and that SR protein binding sites promote binding of the polyadenylation factor cleavage factor I (CFIm) to the weak PAS. These observations may be relevant for cellular PASs.
Copyright © 2016 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  3′ end processing; CFIm; Polyadenylation; RNA splicing; Rous sarcoma virus; SR proteins

Mesh:

Substances:

Year:  2016        PMID: 27596537      PMCID: PMC5045808          DOI: 10.1016/j.virol.2016.08.021

Source DB:  PubMed          Journal:  Virology        ISSN: 0042-6822            Impact factor:   3.616


  59 in total

1.  Characterization of specific protein-RNA complexes associated with the coupling of polyadenylation and last-intron removal.

Authors:  Charles Cooke; James C Alwine
Journal:  Mol Cell Biol       Date:  2002-07       Impact factor: 4.272

2.  Direct interactions between subunits of CPSF and the U2 snRNP contribute to the coupling of pre-mRNA 3' end processing and splicing.

Authors:  Andrea Kyburz; Arno Friedlein; Hanno Langen; Walter Keller
Journal:  Mol Cell       Date:  2006-07-21       Impact factor: 17.970

3.  Serine/arginine-rich proteins contribute to negative regulator of splicing element-stimulated polyadenylation in rous sarcoma virus.

Authors:  Nicole L Maciolek; Mark T McNally
Journal:  J Virol       Date:  2007-08-01       Impact factor: 5.103

4.  Molecular architecture of the human pre-mRNA 3' processing complex.

Authors:  Yongsheng Shi; Dafne Campigli Di Giammartino; Derek Taylor; Ali Sarkeshik; William J Rice; John R Yates; Joachim Frank; James L Manley
Journal:  Mol Cell       Date:  2009-02-13       Impact factor: 17.970

5.  The role of branchpoint and 3'-exon sequences in the control of balanced splicing of avian retrovirus RNA.

Authors:  X D Fu; R A Katz; A M Skalka; T Maniatis
Journal:  Genes Dev       Date:  1991-02       Impact factor: 11.361

6.  Structural basis of UGUA recognition by the Nudix protein CFI(m)25 and implications for a regulatory role in mRNA 3' processing.

Authors:  Qin Yang; Gregory M Gilmartin; Sylvie Doublié
Journal:  Proc Natl Acad Sci U S A       Date:  2010-05-17       Impact factor: 11.205

7.  An interaction between U2AF 65 and CF I(m) links the splicing and 3' end processing machineries.

Authors:  Stefania Millevoi; Clarisse Loulergue; Sabine Dettwiler; Sarah Zeïneb Karaa; Walter Keller; Michael Antoniou; Stéphan Vagner
Journal:  EMBO J       Date:  2006-10-05       Impact factor: 11.598

Review 8.  Mechanisms and consequences of alternative polyadenylation.

Authors:  Dafne Campigli Di Giammartino; Kensei Nishida; James L Manley
Journal:  Mol Cell       Date:  2011-09-16       Impact factor: 17.970

9.  U1 small nuclear ribonucleoprotein and splicing inhibition by the rous sarcoma virus negative regulator of splicing element.

Authors:  L M McNally; M T McNally
Journal:  J Virol       Date:  1999-03       Impact factor: 5.103

10.  A suboptimal src 3' splice site is necessary for efficient replication of Rous sarcoma virus.

Authors:  L Zhang; C M Stoltzfus
Journal:  Virology       Date:  1995-02-01       Impact factor: 3.616

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  1 in total

1.  SRSF3 and SRSF7 modulate 3'UTR length through suppression or activation of proximal polyadenylation sites and regulation of CFIm levels.

Authors:  Oliver Daniel Schwich; Nicole Blümel; Mario Keller; Marius Wegener; Samarth Thonta Setty; Melinda Elaine Brunstein; Ina Poser; Igor Ruiz De Los Mozos; Beatrix Suess; Christian Münch; François McNicoll; Kathi Zarnack; Michaela Müller-McNicoll
Journal:  Genome Biol       Date:  2021-03-11       Impact factor: 13.583

  1 in total

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