Literature DB >> 11786999

NMR solution structure of the isolated Apo Pin1 WW domain: comparison to the x-ray crystal structures of Pin1.

Jennifer A Kowalski1, Kai Liu, Jeffery W Kelly.   

Abstract

The NMR solution structure of the isolated Apo Pin1 WW domain (6-39) reveals that it adopts a twisted three-stranded antiparallel beta-sheet conformation, very similar to the structure exhibited by the crystal of this domain in the context of the two domain Pin1 protein. While the B factors in the apo x-ray crystal structure indicate that loop 1 and loop 2 are conformationally well defined, the solution NMR data suggest that loop 1 is quite flexible, at least in the absence of the ligand. The NMR chemical shift and nuclear Overhauser effect pattern exhibited by the 6-39 Pin1 WW domain has proven to be diagnostic for demonstrating that single site variants of this domain adopt a normally folded structure. Knowledge of this type is critical before embarking on time-consuming kinetic and thermodynamic studies required for a detailed understanding of beta-sheet folding. Copyright 2002 John Wiley & Sons, Inc.

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Year:  2002        PMID: 11786999     DOI: 10.1002/bip.10020

Source DB:  PubMed          Journal:  Biopolymers        ISSN: 0006-3525            Impact factor:   2.505


  35 in total

1.  A de novo redesign of the WW domain.

Authors:  Christina M Kraemer-Pecore; Juliette T J Lecomte; John R Desjarlais
Journal:  Protein Sci       Date:  2003-10       Impact factor: 6.725

2.  Molecular Mechanism of the Pin1-Histone H1 Interaction.

Authors:  Dinusha Jinasena; Robert Simmons; Hawa Gyamfi; Nicholas C Fitzkee
Journal:  Biochemistry       Date:  2018-12-18       Impact factor: 3.162

3.  Evidence for small-molecule-mediated loop stabilization in the structure of the isolated Pin1 WW domain.

Authors:  David E Mortenson; Dale F Kreitler; Hyun Gi Yun; Samuel H Gellman; Katrina T Forest
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2013-11-19

4.  Post-Translational Backbone Engineering through Selenomethionine-Mediated Incorporation of Freidinger Lactams.

Authors:  Dillon T Flood; Nicholas L Yan; Philip E Dawson
Journal:  Angew Chem Int Ed Engl       Date:  2018-06-11       Impact factor: 15.336

5.  Evaluating beta-turn mimics as beta-sheet folding nucleators.

Authors:  Amelia A Fuller; Deguo Du; Feng Liu; Jennifer E Davoren; Gira Bhabha; Gerard Kroon; David A Case; H Jane Dyson; Evan T Powers; Peter Wipf; Martin Gruebele; Jeffery W Kelly
Journal:  Proc Natl Acad Sci U S A       Date:  2009-06-18       Impact factor: 11.205

6.  Folding mechanisms of individual beta-hairpins in a Go model of Pin1 WW domain by all-atom molecular dynamics simulations.

Authors:  Zhonglin Luo; Jiandong Ding; Yaoqi Zhou
Journal:  J Chem Phys       Date:  2008-06-14       Impact factor: 3.488

7.  Sequence determinants of thermodynamic stability in a WW domain--an all-beta-sheet protein.

Authors:  Marcus Jäger; Maria Dendle; Jeffery W Kelly
Journal:  Protein Sci       Date:  2009-08       Impact factor: 6.725

8.  The Dependence of Carbohydrate-Aromatic Interaction Strengths on the Structure of the Carbohydrate.

Authors:  Che-Hsiung Hsu; Sangho Park; David E Mortenson; B Lachele Foley; Xiaocong Wang; Robert J Woods; David A Case; Evan T Powers; Chi-Huey Wong; H Jane Dyson; Jeffery W Kelly
Journal:  J Am Chem Soc       Date:  2016-06-14       Impact factor: 15.419

9.  A cross-strand Trp Trp pair stabilizes the hPin1 WW domain at the expense of function.

Authors:  Marcus Jäger; Maria Dendle; Amelia A Fuller; Jeffery W Kelly
Journal:  Protein Sci       Date:  2007-08-31       Impact factor: 6.725

10.  Using Cooperatively Folded Peptides To Measure Interaction Energies and Conformational Propensities.

Authors:  Maziar S Ardejani; Evan T Powers; Jeffery W Kelly
Journal:  Acc Chem Res       Date:  2017-07-19       Impact factor: 22.384

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