Literature DB >> 11775742

MUNIN: application of three-way decomposition to the analysis of heteronuclear NMR relaxation data.

D M Korzhneva1, I V Ibraghimov, M Billeter, V Y Orekhov.   

Abstract

MUNIN (Multidimensional NMR Spectra Interpretation), a recently introduced approach exploiting the mathematical concept of three-way decomposition, is proposed for separation and quantitative relaxation measurements of strongly overlapped resonances in sets of heteronuclear two-dimensional spectra that result from typical relaxation experiments. The approach is general and may also be applied to sets of two-dimensional spectra with arbitrary modulation along the third dimension (e.g., J-coupling, diffusion). Here, the method is applied for the analysis of 15N rotating frame relaxation data.

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Year:  2001        PMID： 11775742     DOI： 10.1023/a:1012982830367

Source DB:  PubMed          Journal:  J Biomol NMR        ISSN： 0925-2738            Impact factor:   2.835


  5 in total

1.  MUNIN: a new approach to multi-dimensional NMR spectra interpretation.

Authors:  V Y Orekhov; I V Ibraghimov; M Billeter
Journal:  J Biomol NMR       Date:  2001-05       Impact factor: 2.835

Review 2.  Protein dynamics from NMR.

Authors:  L E Kay
Journal:  Nat Struct Biol       Date:  1998-07

3.  An Off-resonance Rotating Frame Relaxation Experiment for the Investigation of Macromolecular Dynamics Using Adiabatic Rotations

Authors: 
Journal:  J Magn Reson       Date:  1998-04       Impact factor: 2.229

4.  Expression of the blue copper protein azurin from Pseudomonas aeruginosa in Escherichia coli.

Authors:  B G Karlsson; T Pascher; M Nordling; R H Arvidsson; L G Lundberg
Journal:  FEBS Lett       Date:  1989-03-27       Impact factor: 4.124

5.  3D NMR experiments for measuring 15N relaxation data of large proteins: application to the 44 kDa ectodomain of SIV gp41.

Authors:  M Caffrey; J Kaufman; S J Stahl; P T Wingfield; A M Gronenborn; G M Clore
Journal:  J Magn Reson       Date:  1998-12       Impact factor: 2.229
  5 in total
  28 in total

1.  Off-resonance R1rho relaxation outside of the fast exchange limit: an experimental study of a cavity mutant of T4 lysozyme.

Authors:  Dmitry M Korzhnev; Vladislav Yu Orekhov; Frederick W Dahlquist; Lewis E Kay
Journal:  J Biomol NMR       Date:  2003-05       Impact factor: 2.835

2.  Optimizing resolution in multidimensional NMR by three-way decomposition.

Authors:  Vladislav Yu Orekhov; Ilghiz Ibraghimov; Martin Billeter
Journal:  J Biomol NMR       Date:  2003-10       Impact factor: 2.835

3.  NMR detection of multiple transitions to low-populated states in azurin.

Authors:  Dmitry M Korzhnev; B Göran Karlsson; Vladislav Yu Orekhov; Martin Billeter
Journal:  Protein Sci       Date:  2003-01       Impact factor: 6.725

4.  Non-uniform sampling of NMR relaxation data.

Authors:  Troels E Linnet; Kaare Teilum
Journal:  J Biomol NMR       Date:  2016-02-04       Impact factor: 2.835

5.  Analytical solution to the coupled evolution of multidimensional NMR data.

Authors:  Geoffrey A Mueller
Journal:  J Biomol NMR       Date:  2009-03-24       Impact factor: 2.835

6.  A reduced dimensionality NMR pulse sequence and an efficient protocol for unambiguous assignment in intrinsically disordered proteins.

Authors:  Jithender G Reddy; Ramakrishna V Hosur
Journal:  J Biomol NMR       Date:  2014-05-23       Impact factor: 2.835

7.  A six-dimensional alpha proton detection-based APSY experiment for backbone assignment of intrinsically disordered proteins.

Authors:  Xuejun Yao; Stefan Becker; Markus Zweckstetter
Journal:  J Biomol NMR       Date:  2014-11-04       Impact factor: 2.835

8.  Automation of peak-tracking analysis of stepwise perturbed NMR spectra.

Authors:  Tommaso Banelli; Marco Vuano; Federico Fogolari; Andrea Fusiello; Gennaro Esposito; Alessandra Corazza
Journal:  J Biomol NMR       Date:  2017-02-17       Impact factor: 2.835

Review 9.  Biomolecular NMR data analysis.

Authors:  Michael R Gryk; Jay Vyas; Mark W Maciejewski
Journal:  Prog Nucl Magn Reson Spectrosc       Date:  2010-05       Impact factor: 9.795

10.  PICKY: a novel SVD-based NMR spectra peak picking method.

Authors:  Babak Alipanahi; Xin Gao; Emre Karakoc; Logan Donaldson; Ming Li
Journal:  Bioinformatics       Date:  2009-06-15       Impact factor: 6.937
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