Literature DB >> 11773027

Comparing machine learning classifiers for diagnosing glaucoma from standard automated perimetry.

Michael H Goldbaum1, Pamela A Sample, Kwokleung Chan, Julia Williams, Te-Won Lee, Eytan Blumenthal, Christopher A Girkin, Linda M Zangwill, Christopher Bowd, Terrence Sejnowski, Robert N Weinreb.   

Abstract

PURPOSE: To determine which machine learning classifier learns best to interpret standard automated perimetry (SAP) and to compare the best of the machine classifiers with the global indices of STATPAC 2 and with experts in glaucoma.
METHODS: Multilayer perceptrons (MLP), support vector machines (SVM), mixture of Gaussian (MoG), and mixture of generalized Gaussian (MGG) classifiers were trained and tested by cross validation on the numerical plot of absolute sensitivity plus age of 189 normal eyes and 156 glaucomatous eyes, designated as such by the appearance of the optic nerve. The authors compared performance of these classifiers with the global indices of STATPAC, using the area under the ROC curve. Two human experts were judged against the machine classifiers and the global indices by plotting their sensitivity-specificity pairs.
RESULTS: MoG had the greatest area under the ROC curve of the machine classifiers. Pattern SD (PSD) and corrected PSD (CPSD) had the largest areas under the curve of the global indices. MoG had significantly greater ROC area than PSD and CPSD. Human experts were not better at classifying visual fields than the machine classifiers or the global indices.
CONCLUSIONS: MoG, using the entire visual field and age for input, interpreted SAP better than the global indices of STATPAC. Machine classifiers may augment the global indices of STATPAC.

Entities:  

Mesh:

Year:  2002        PMID: 11773027

Source DB:  PubMed          Journal:  Invest Ophthalmol Vis Sci        ISSN: 0146-0404            Impact factor:   4.799


  39 in total

1.  Using unsupervised learning with independent component analysis to identify patterns of glaucomatous visual field defects.

Authors:  Michael H Goldbaum; Pamela A Sample; Zuohua Zhang; Kwokleung Chan; Jiucang Hao; Te-Won Lee; Catherine Boden; Christopher Bowd; Rupert Bourne; Linda Zangwill; Terrence Sejnowski; David Spinak; Robert N Weinreb
Journal:  Invest Ophthalmol Vis Sci       Date:  2005-10       Impact factor: 4.799

2.  Unsupervised learning with independent component analysis can identify patterns of glaucomatous visual field defects.

Authors:  Michael Henry Goldbaum
Journal:  Trans Am Ophthalmol Soc       Date:  2005

Review 3.  Deep Belief Networks for Electroencephalography: A Review of Recent Contributions and Future Outlooks.

Authors:  Faezeh Movahedi; James L Coyle; Ervin Sejdic
Journal:  IEEE J Biomed Health Inform       Date:  2017-07-14       Impact factor: 5.772

Review 4.  Detection of visual field progression in glaucoma with standard achromatic perimetry: a review and practical implications.

Authors:  Kouros Nouri-Mahdavi; Nariman Nassiri; Annette Giangiacomo; Joseph Caprioli
Journal:  Graefes Arch Clin Exp Ophthalmol       Date:  2011-08-26       Impact factor: 3.117

5.  Predicting glaucomatous progression in glaucoma suspect eyes using relevance vector machine classifiers for combined structural and functional measurements.

Authors:  Christopher Bowd; Intae Lee; Michael H Goldbaum; Madhusudhanan Balasubramanian; Felipe A Medeiros; Linda M Zangwill; Christopher A Girkin; Jeffrey M Liebmann; Robert N Weinreb
Journal:  Invest Ophthalmol Vis Sci       Date:  2012-04-30       Impact factor: 4.799

6.  Performance of the 10-2 and 24-2 Visual Field Tests for Detecting Central Visual Field Abnormalities in Glaucoma.

Authors:  Zhichao Wu; Felipe A Medeiros; Robert N Weinreb; Linda M Zangwill
Journal:  Am J Ophthalmol       Date:  2018-08-10       Impact factor: 5.258

7.  Agreement and Predictors of Discordance of 6 Visual Field Progression Algorithms.

Authors:  Osamah J Saeedi; Tobias Elze; Loris D'Acunto; Ramya Swamy; Vikram Hegde; Surabhi Gupta; Amin Venjara; Joby Tsai; Jonathan S Myers; Sarah R Wellik; Carlos Gustavo De Moraes; Louis R Pasquale; Lucy Q Shen; Michael V Boland
Journal:  Ophthalmology       Date:  2019-02-04       Impact factor: 12.079

8.  Computerized expert system for evaluation of automated visual fields from the Ischemic Optic Neuropathy Decompression Trial: methods, baseline fields, and six-month longitudinal follow-up.

Authors:  Steven E Feldon
Journal:  Trans Am Ophthalmol Soc       Date:  2004

9.  Analysis with support vector machine shows HIV-positive subjects without infectious retinitis have mfERG deficiencies compared to normal eyes.

Authors:  Michael H Goldbaum; Irina Falkenstein; Igor Kozak; Jiucang Hao; Dirk-Uwe Bartsch; Terrance Sejnowski; William R Freeman
Journal:  Trans Am Ophthalmol Soc       Date:  2008

10.  Proteome-wide prediction of novel DNA/RNA-binding proteins using amino acid composition and periodicity in the hyperthermophilic archaeon Pyrococcus furiosus.

Authors:  Kosuke Fujishima; Mizuki Komasa; Sayaka Kitamura; Haruo Suzuki; Masaru Tomita; Akio Kanai
Journal:  DNA Res       Date:  2007-06-15       Impact factor: 4.458

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