Literature DB >> 11767205

Pattern formation in discrete cell lattices.

E Plahte1.   

Abstract

In recent years, models for lattices of discrete cells have been attracting increased attention due to their greater flexibility to represent signalling and contact-dependent cell-cell interaction than conventional reaction-diffusion models. Using the almost forgotten method of Othmer and Scriven (1971) to calculate eigenvalues and eigenvectors for the Jacobian of the homogeneous state, a Turing-like linear stability analysis is carried out for diffusion-driven (DD) and signalling-driven (SD) discrete models. The method is a generalisation of the original method of Turing (1952). For two-species models it is found that there are profound differences between the two types of model when the size of the lattice increases. For DD models, the homogeneous state is typically either always stable, always unstable, or becomes unstable when the lattice gets suffficiently large. For SD models, the homogeneous state is typically unstable independent of lattice size, and stable only in a minor part of parameter space. Thus, SD models seem in general more pattern-prone than DD models. The conjecture that the linear analysis predicts the final pattern is investigated for a DD system with Thomas internal dynamics. Commonly the final pattern resembles the pattern of the initial perturbation of the homogeneous state, but this is by no means a general feature. When applied to a recent model for Delta-Notch lateral inhibition, linear analysis must be supplemented by various non-linear techniques to get a deeper insight into the patterning mechanisms. The overall conclusion is that a linear Turing analysis may be useful for predicting pattern, but when it comes to explaining patterns, non-linear analysis cannot be ignored.

Entities:  

Mesh:

Year:  2001        PMID: 11767205     DOI: 10.1007/s002850100105

Source DB:  PubMed          Journal:  J Math Biol        ISSN: 0303-6812            Impact factor:   2.259


  15 in total

1.  Oscillations and patterns in spatially discrete models for developmental intercellular signalling.

Authors:  Steven D Webb; Markus R Owen
Journal:  J Math Biol       Date:  2003-10-27       Impact factor: 2.259

2.  Continuum limits of pattern formation in hexagonal-cell monolayers.

Authors:  R D O'Dea; J R King
Journal:  J Math Biol       Date:  2011-05-20       Impact factor: 2.259

3.  Mathematical study of the role of Delta/Notch lateral inhibition during primary branching of Drosophila trachea development.

Authors:  Yoshiki Koizumi; Yoh Iwasa; Tsuyoshi Hirashima
Journal:  Biophys J       Date:  2012-12-18       Impact factor: 4.033

4.  Dynamic mechanical finite element model of biological cells for studying cellular pattern formation.

Authors:  Jieling Zhao; Hammad Naveed; Sema Kachalo; Youfang Cao; Wei Tian; Jie Liang
Journal:  Conf Proc IEEE Eng Med Biol Soc       Date:  2013

Review 5.  Noise in biology.

Authors:  Lev S Tsimring
Journal:  Rep Prog Phys       Date:  2014-01-20

6.  A GRAPH PARTITIONING APPROACH TO PREDICTING PATTERNS IN LATERAL INHIBITION SYSTEMS.

Authors:  Ana S Rufino Ferreira; Murat Arcak
Journal:  SIAM J Appl Dyn Syst       Date:  2013-12-17       Impact factor: 2.316

7.  Spatial pattern formation in the lung.

Authors:  Graham M Donovan; Thibaut Kritter
Journal:  J Math Biol       Date:  2014-05-09       Impact factor: 2.259

8.  Effects of growth and mutation on pattern formation in tissues.

Authors:  Benedicte Mengel Pers; Sandeep Krishna; Sagar Chakraborty; Simone Pigolotti; Vedran Sekara; Szabolcs Semsey; Mogens H Jensen
Journal:  PLoS One       Date:  2012-11-07       Impact factor: 3.240

9.  The genotype-phenotype relationship in multicellular pattern-generating models--the neglected role of pattern descriptors.

Authors:  Harald Martens; Siren R Veflingstad; Erik Plahte; Magni Martens; Dominique Bertrand; Stig W Omholt
Journal:  BMC Syst Biol       Date:  2009-09-04

10.  Cis-interactions between Notch and Delta generate mutually exclusive signalling states.

Authors:  David Sprinzak; Amit Lakhanpal; Lauren Lebon; Leah A Santat; Michelle E Fontes; Graham A Anderson; Jordi Garcia-Ojalvo; Michael B Elowitz
Journal:  Nature       Date:  2010-04-25       Impact factor: 49.962

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.