Literature DB >> 21670263

Structural and functional characterization of an atypical activation domain in erythroid Kruppel-like factor (EKLF).

Caroline Mas1, Mathieu Lussier-Price, Shefali Soni, Thomas Morse, Geneviève Arseneault, Paola Di Lello, Julien Lafrance-Vanasse, James J Bieker, James G Omichinski.   

Abstract

Erythroid Krüppel-like factor (EKLF) plays an important role in erythroid development by stimulating β-globin gene expression. We have examined the details by which the minimal transactivation domain (TAD) of EKLF (EKLFTAD) interacts with several transcriptional regulatory factors. We report that EKLFTAD displays homology to the p53TAD and, like the p53TAD, can be divided into two functional subdomains (EKLFTAD1 and EKLFTAD2). Based on sequence analysis, we found that EKLFTAD2 is conserved in KLF2, KLF4, KLF5, and KLF15. In addition, we demonstrate that EKLFTAD2 binds the amino-terminal PH domain of the Tfb1/p62 subunit of TFIIH (Tfb1PH/p62PH) and four domains of CREB-binding protein/p300. The solution structure of the EKLFTAD2/Tfb1PH complex indicates that EKLFTAD2 binds Tfb1PH in an extended conformation, which is in contrast to the α-helical conformation seen for p53TAD2 in complex with Tfb1PH. These studies provide detailed mechanistic information into EKLFTAD functions as well as insights into potential interactions of the TADs of other KLF proteins. In addition, they suggest that not only have acidic TADs evolved so that they bind using different conformations on a common target, but that transitioning from a disordered to a more ordered state is not a requirement for their ability to bind multiple partners.

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Year:  2011        PMID: 21670263      PMCID: PMC3127900          DOI: 10.1073/pnas.1017029108

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  47 in total

1.  Crystallography & NMR system: A new software suite for macromolecular structure determination.

Authors:  A T Brünger; P D Adams; G M Clore; W L DeLano; P Gros; R W Grosse-Kunstleve; J S Jiang; J Kuszewski; M Nilges; N S Pannu; R J Read; L M Rice; T Simonson; G L Warren
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  1998-09-01

2.  Mutational analysis of a transcriptional activation region of the VP16 protein of herpes simplex virus.

Authors:  S M Sullivan; P J Horn; V A Olson; A H Koop; W Niu; R H Ebright; S J Triezenberg
Journal:  Nucleic Acids Res       Date:  1998-10-01       Impact factor: 16.971

3.  Recruitment of p300/CBP in p53-dependent signal pathways.

Authors:  M L Avantaggiati; V Ogryzko; K Gardner; A Giordano; A S Levine; K Kelly
Journal:  Cell       Date:  1997-06-27       Impact factor: 41.582

4.  Activation of p53 sequence-specific DNA binding by acetylation of the p53 C-terminal domain.

Authors:  W Gu; R G Roeder
Journal:  Cell       Date:  1997-08-22       Impact factor: 41.582

5.  Structure of the MDM2 oncoprotein bound to the p53 tumor suppressor transactivation domain.

Authors:  P H Kussie; S Gorina; V Marechal; B Elenbaas; J Moreau; A J Levine; N P Pavletich
Journal:  Science       Date:  1996-11-08       Impact factor: 47.728

6.  Protein backbone angle restraints from searching a database for chemical shift and sequence homology.

Authors:  G Cornilescu; F Delaglio; A Bax
Journal:  J Biomol NMR       Date:  1999-03       Impact factor: 2.835

7.  NMR structure of the amino-terminal domain from the Tfb1 subunit of TFIIH and characterization of its phosphoinositide and VP16 binding sites.

Authors:  Paola Di Lello; Bao D Nguyen; Tamara N Jones; Krzysztof Potempa; Michael S Kobor; Pascale Legault; James G Omichinski
Journal:  Biochemistry       Date:  2005-05-31       Impact factor: 3.162

8.  Regulation of erythroid Krüppel-like factor (EKLF) transcriptional activity by phosphorylation of a protein kinase casein kinase II site within its interaction domain.

Authors:  L Ouyang; X Chen; J J Bieker
Journal:  J Biol Chem       Date:  1998-09-04       Impact factor: 5.157

9.  Acetylation and modulation of erythroid Krüppel-like factor (EKLF) activity by interaction with histone acetyltransferases.

Authors:  W Zhang; J J Bieker
Journal:  Proc Natl Acad Sci U S A       Date:  1998-08-18       Impact factor: 11.205

10.  Stage-specific repression by the EKLF transcriptional activator.

Authors:  Xiaoyong Chen; James J Bieker
Journal:  Mol Cell Biol       Date:  2004-12       Impact factor: 4.272

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  23 in total

1.  Structures of KIX domain of CBP in complex with two FOXO3a transactivation domains reveal promiscuity and plasticity in coactivator recruitment.

Authors:  Feng Wang; Christopher B Marshall; Kazuo Yamamoto; Guang-Yao Li; Geneviève M C Gasmi-Seabrook; Hitoshi Okada; Tak W Mak; Mitsuhiko Ikura
Journal:  Proc Natl Acad Sci U S A       Date:  2012-04-02       Impact factor: 11.205

2.  Kruppel-like factor 15 is critical for vascular inflammation.

Authors:  Yuan Lu; Lisheng Zhang; Xudong Liao; Panjamaporn Sangwung; Domenick A Prosdocimo; Guangjin Zhou; Alexander R Votruba; Leigh Brian; Yuh Jung Han; Huiyun Gao; Yunmei Wang; Koichi Shimizu; Kaitlyn Weinert-Stein; Maria Khrestian; Daniel I Simon; Neil J Freedman; Mukesh K Jain
Journal:  J Clin Invest       Date:  2013-09-03       Impact factor: 14.808

3.  Kruppel-like factor 15 is a critical regulator of cardiac lipid metabolism.

Authors:  Domenick A Prosdocimo; Priti Anand; Xudong Liao; Han Zhu; Shamanthika Shelkay; Pedro Artero-Calderon; Lilei Zhang; Jacob Kirsh; D'Vesharronne Moore; Mariana G Rosca; Edwin Vazquez; Janos Kerner; Kemal M Akat; Zev Williams; Jihe Zhao; Hisashi Fujioka; Thomas Tuschl; Xiaodong Bai; P Christian Schulze; Charles L Hoppel; Mukesh K Jain; Saptarsi M Haldar
Journal:  J Biol Chem       Date:  2014-01-08       Impact factor: 5.157

4.  Loss of Krüppel-like factor 6 cripples podocyte mitochondrial function.

Authors:  Jeffrey B Kopp
Journal:  J Clin Invest       Date:  2015-02-17       Impact factor: 14.808

5.  Functional interactions between erythroid Krüppel-like factor (EKLF/KLF1) and protein phosphatase PPM1B/PP2Cβ.

Authors:  Yvette Y Yien; James J Bieker
Journal:  J Biol Chem       Date:  2012-03-05       Impact factor: 5.157

Review 6.  Krüppel-like factors in mammalian stem cells and development.

Authors:  Agnieszka B Bialkowska; Vincent W Yang; Sandeep K Mallipattu
Journal:  Development       Date:  2017-03-01       Impact factor: 6.868

7.  Endothelial Kruppel-like factor 4 protects against atherothrombosis in mice.

Authors:  Guangjin Zhou; Anne Hamik; Lalitha Nayak; Hongmei Tian; Hong Shi; Yuan Lu; Nikunj Sharma; Xudong Liao; Andrew Hale; Lauren Boerboom; Ryan E Feaver; Huiyun Gao; Amar Desai; Alvin Schmaier; Stanton L Gerson; Yunmei Wang; G Brandon Atkins; Brett R Blackman; Daniel I Simon; Mukesh K Jain
Journal:  J Clin Invest       Date:  2012-11-19       Impact factor: 14.808

8.  The acidic transcription activator Gcn4 binds the mediator subunit Gal11/Med15 using a simple protein interface forming a fuzzy complex.

Authors:  Peter S Brzovic; Clemens C Heikaus; Leonid Kisselev; Robert Vernon; Eric Herbig; Derek Pacheco; Linda Warfield; Peter Littlefield; David Baker; Rachel E Klevit; Steven Hahn
Journal:  Mol Cell       Date:  2011-12-23       Impact factor: 17.970

Review 9.  EKLF/KLF1, a tissue-restricted integrator of transcriptional control, chromatin remodeling, and lineage determination.

Authors:  Yvette Y Yien; James J Bieker
Journal:  Mol Cell Biol       Date:  2012-10-22       Impact factor: 4.272

10.  A frustrated binding interface for intrinsically disordered proteins.

Authors:  Per Jemth; Xin Mu; Åke Engström; Jakob Dogan
Journal:  J Biol Chem       Date:  2014-01-13       Impact factor: 5.157

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