Literature DB >> 11731786

Group II introns as controllable gene targeting vectors for genetic manipulation of bacteria.

M Karberg1, H Guo, J Zhong, R Coon, J Perutka, A M Lambowitz.   

Abstract

Mobile group II introns can be retargeted to insert into virtually any desired DNA target. Here we show that retargeted group II introns can be used for highly specific chromosomal gene disruption in Escherichia coli and other bacteria at frequencies of 0.1-22%. Furthermore, the introns can be used to introduce targeted chromosomal breaks, which can be repaired by transformation with a homologous DNA fragment, enabling the introduction of point mutations. Because of their wide host range, mobile group II introns should be useful for genetic engineering and functional genomics in a wide variety of bacteria.

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Year:  2001        PMID: 11731786     DOI: 10.1038/nbt1201-1162

Source DB:  PubMed          Journal:  Nat Biotechnol        ISSN: 1087-0156            Impact factor:   54.908


  86 in total

1.  Targeted and random bacterial gene disruption using a group II intron (targetron) vector containing a retrotransposition-activated selectable marker.

Authors:  Jin Zhong; Michael Karberg; Alan M Lambowitz
Journal:  Nucleic Acids Res       Date:  2003-03-15       Impact factor: 16.971

2.  Genetic manipulation of Lactococcus lactis by using targeted group II introns: generation of stable insertions without selection.

Authors:  Courtney L Frazier; Joseph San Filippo; Alan M Lambowitz; David A Mills
Journal:  Appl Environ Microbiol       Date:  2003-02       Impact factor: 4.792

3.  High-affinity binding site for a group II intron-encoded reverse transcriptase/maturase within a stem-loop structure in the intron RNA.

Authors:  Kazuo Watanabe; Alan M Lambowitz
Journal:  RNA       Date:  2004-07-23       Impact factor: 4.942

4.  A conjugation-based system for genetic analysis of group II intron splicing in Lactococcus lactis.

Authors:  Joanna R Klein; Yuqing Chen; Dawn A Manias; Jin Zhuo; Liang Zhou; Craig L Peebles; Gary M Dunny
Journal:  J Bacteriol       Date:  2004-04       Impact factor: 3.490

Review 5.  Group II introns: mobile ribozymes that invade DNA.

Authors:  Alan M Lambowitz; Steven Zimmerly
Journal:  Cold Spring Harb Perspect Biol       Date:  2011-08-01       Impact factor: 10.005

6.  Use of targetrons to disrupt essential and nonessential genes in Staphylococcus aureus reveals temperature sensitivity of Ll.LtrB group II intron splicing.

Authors:  Jun Yao; Jin Zhong; Yuan Fang; Edward Geisinger; Richard P Novick; Alan M Lambowitz
Journal:  RNA       Date:  2006-06-01       Impact factor: 4.942

7.  Identification of a genetic locus responsible for antimicrobial peptide resistance in Clostridium difficile.

Authors:  Shonna M McBride; Abraham L Sonenshein
Journal:  Infect Immun       Date:  2010-10-25       Impact factor: 3.441

8.  Mechanism of IS200/IS605 family DNA transposases: activation and transposon-directed target site selection.

Authors:  Orsolya Barabas; Donald R Ronning; Catherine Guynet; Alison Burgess Hickman; Bao Ton-Hoang; Michael Chandler; Fred Dyda
Journal:  Cell       Date:  2008-01-25       Impact factor: 41.582

9.  Group II intron mobility using nascent strands at DNA replication forks to prime reverse transcription.

Authors:  Jin Zhong; Alan M Lambowitz
Journal:  EMBO J       Date:  2003-09-01       Impact factor: 11.598

10.  Enhanced group II intron retrohoming in magnesium-deficient Escherichia coli via selection of mutations in the ribozyme core.

Authors:  David M Truong; David J Sidote; Rick Russell; Alan M Lambowitz
Journal:  Proc Natl Acad Sci U S A       Date:  2013-09-16       Impact factor: 11.205

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