Literature DB >> 11700739

Spatial transformations of diffusion tensor magnetic resonance images.

D C Alexander1, C Pierpaoli, P J Basser, J C Gee.   

Abstract

We address the problem of applying spatial transformations (or "image warps") to diffusion tensor magnetic resonance images. The orientational information that these images contain must be handled appropriately when they are transformed spatially during image registration. We present solutions for global transformations of three-dimensional images up to 12-parameter affine complexity and indicate how our methods can be extended for higher order transformations. Several approaches are presented and tested using synthetic data. One method, the preservation of principal direction algorithm, which takes into account shearing, stretching and rigid rotation, is shown to be the most effective. Additional registration experiments are performed on human brain data obtained from a single subject, whose head was imaged in three different orientations within the scanner. All of our methods improve the consistency between registered and target images over naïve warping algorithms.

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Year:  2001        PMID: 11700739     DOI: 10.1109/42.963816

Source DB:  PubMed          Journal:  IEEE Trans Med Imaging        ISSN: 0278-0062            Impact factor:   10.048


  236 in total

1.  Spatial normalization of diffusion tensor MRI using multiple channels.

Authors:  Hae-Jeong Park; Marek Kubicki; Martha E Shenton; Alexandre Guimond; Robert W McCarley; Stephan E Maier; Ron Kikinis; Ferenc A Jolesz; Carl-Fredrik Westin
Journal:  Neuroimage       Date:  2003-12       Impact factor: 6.556

2.  Clinical contributors to cerebral white matter integrity in HIV-infected individuals.

Authors:  Assawin Gongvatana; Ronald A Cohen; Stephen Correia; Kathryn N Devlin; Jadrian Miles; Hakmook Kang; Hernando Ombao; Bradford Navia; David H Laidlaw; Karen T Tashima
Journal:  J Neurovirol       Date:  2011-10-01       Impact factor: 2.643

3.  Diffeomorphic Matching of Diffusion Tensor Images.

Authors:  Yan Cao; Michael I Miller; Susumu Mori; Raimond L Winslow; Laurent Younes
Journal:  Proc IEEE Comput Soc Conf Comput Vis Pattern Recognit       Date:  2006-07-05

4.  Gene network effects on brain microstructure and intellectual performance identified in 472 twins.

Authors:  Ming-Chang Chiang; Marina Barysheva; Katie L McMahon; Greig I de Zubicaray; Kori Johnson; Grant W Montgomery; Nicholas G Martin; Arthur W Toga; Margaret J Wright; Paul Shapshak; Paul M Thompson
Journal:  J Neurosci       Date:  2012-06-20       Impact factor: 6.167

5.  Atlas-based fiber reconstruction from diffusion tensor MRI data.

Authors:  Sebastiano Barbieri; Jan Klein; Miriam H A Bauer; Christopher Nimsky; Horst K Hahn
Journal:  Int J Comput Assist Radiol Surg       Date:  2012-06-24       Impact factor: 2.924

6.  Role of standardized and study-specific human brain diffusion tensor templates in inter-subject spatial normalization.

Authors:  Shengwei Zhang; Konstantinos Arfanakis
Journal:  J Magn Reson Imaging       Date:  2012-10-03       Impact factor: 4.813

7.  Feasibility of creating a high-resolution 3D diffusion tensor imaging based atlas of the human brainstem: a case study at 11.7 T.

Authors:  Manisha Aggarwal; Jiangyang Zhang; Olga Pletnikova; Barbara Crain; Juan Troncoso; Susumu Mori
Journal:  Neuroimage       Date:  2013-02-04       Impact factor: 6.556

8.  Determining Cardiac Fiber Orientation Using FSL and Registered Ultrasound/DTI volumes.

Authors:  James Dormer; Xulei Qin; Ming Shen; Silun Wang; Xiaodong Zhang; Rong Jiang; Mary B Wagner; Baowei Fei
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2016-04-01

9.  Patient-specific modeling of the heart: estimation of ventricular fiber orientations.

Authors:  Fijoy Vadakkumpadan; Hermenegild Arevalo; Natalia A Trayanova
Journal:  J Vis Exp       Date:  2013-01-08       Impact factor: 1.355

10.  A brain MRI atlas of the common squirrel monkey, Saimiri sciureus.

Authors:  Yurui Gao; Shweta P Khare; Swetasudha Panda; Ann S Choe; Iwona Stepniewska; Xia Li; Zhoahua Ding; Adam Anderson; Bennett A Landman
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2014-03-13
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