Literature DB >> 11674399

Polyoxypeptins A and B Produced by Streptomyces: Apoptosis-Inducing Cyclic Depsipeptides Containing the Novel Amino Acid (2S,3R)-3-Hydroxy-3-methylproline.

Kazuo Umezawa1, Kumi Nakazawa, Yoko Ikeda, Hiroshi Naganawa, Shinichi Kondo.   

Abstract

Potent apoptosis-inducing peptides, polyoxypeptins A (1) and B (2) were isolated from the culture broth of Streptomyces sp. by solvent extraction and column chromatography. Structural elucidation of 1 by MS and NMR analyses revealed that it is a cyclic hexadepsipeptide having a novel amino acid and a previously unrecognized N-acyl side chain. The depsipeptide consisted of 3-hydroxyleucine, N-hydroxyvaline, N-hydroxyalanine, piperazic acid, 5-hydroxyhexahydropiperazine-3-carboxylic acid, and an unusual and hitherto unreported amino acid, 3-hydroxy-3-methylproline. Alanine and valine obtained from the hydrolyzate of 1 were both in the L-configuration as concluded from chiral TLC analysis. Then, the absolute structure of 1 was determined with the relative structure obtained from X-ray crystallographic analysis, and the new amino acid was isolated and confirmed to be (2S,3R)-3-hydroxy-3-methylproline (3). MS and NMR of 2 exhibited that it is a monodeoxy compound of 1. Stereochemistry of 2 was determined by degradation studies. Both 1 and 2 at a concentration of about 0.1 &mgr;g/mL induced early cell death, nuclear fragmentation, and internucleosomal DNA scission, all of which are characteristic of apoptosis, in human pancreatic carcinoma AsPC-1 cells.

Entities:  

Year:  1999        PMID: 11674399     DOI: 10.1021/jo981512n

Source DB:  PubMed          Journal:  J Org Chem        ISSN: 0022-3263            Impact factor:   4.354


  11 in total

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Journal:  Appl Environ Microbiol       Date:  2011-04-15       Impact factor: 4.792

Review 2.  Oxidative Cyclization in Natural Product Biosynthesis.

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Journal:  Chem Rev       Date:  2016-12-12       Impact factor: 60.622

3.  Structure-Property Relationship Study of N-(Hydroxy)Peptides for the Design of Self-Assembled Parallel β-Sheets.

Authors:  Alexis D Richaud; Stéphane P Roche
Journal:  J Org Chem       Date:  2020-09-17       Impact factor: 4.354

4.  Linear Peptides Are the Major Products of a Biosynthetic Pathway That Encodes for Cyclic Depsipeptides.

Authors:  Thomas P Wyche; Antonio C Ruzzini; Christine Beemelmanns; Ki Hyun Kim; Jonathan L Klassen; Shugeng Cao; Michael Poulsen; Tim S Bugni; Cameron R Currie; Jon Clardy
Journal:  Org Lett       Date:  2017-03-22       Impact factor: 6.005

Review 5.  Bacterial symbionts in agricultural systems provide a strategic source for antibiotic discovery.

Authors:  Timothy R Ramadhar; Christine Beemelmanns; Cameron R Currie; Jon Clardy
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6.  Biosynthesis of piperazic acid via N5-hydroxy-ornithine in Kutzneria spp. 744.

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7.  Efficient Chemoenzymatic Synthesis of (2S,3R)-3-Hydroxy-3-Methylproline, a Key Fragment in Polyoxypeptin A and FR225659.

Authors:  Xiao Zhang; Hans Renata
Journal:  Tetrahedron       Date:  2019-04-05       Impact factor: 2.457

8.  Dentigerumycin: a bacterial mediator of an ant-fungus symbiosis.

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9.  Identification and characterization of the biosynthetic gene cluster of polyoxypeptin A, a potent apoptosis inducer.

Authors:  Yanhua Du; Yemin Wang; Tingting Huang; Meifeng Tao; Zixin Deng; Shuangjun Lin
Journal:  BMC Microbiol       Date:  2014-02-08       Impact factor: 3.605

10.  A Machine Learning Bioinformatics Method to Predict Biological Activity from Biosynthetic Gene Clusters.

Authors:  Allison S Walker; Jon Clardy
Journal:  J Chem Inf Model       Date:  2021-05-27       Impact factor: 4.956

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