Literature DB >> 11669664

Models for Arginine-Metal Binding. Synthesis of Guanidine and Urea Ligands through Amination and Hydration of a Cyanamide Ligand Bound to Platinum(II), Osmium(III), and Cobalt(III).

David P. Fairlie1, W. Gregory Jackson, Brian W. Skelton, Huo Wen, Allan H. White, Wasantha A. Wickramasinghe, Tai Chin Woon, Henry Taube.   

Abstract

Dimethylcyanamide (N identical withCNMe(2)) has been coordinated to both hard and soft electrophiles ((NH(3))(5)Co(3+), (NH(3))(5)Os(3+), (dien)Pt(2+)) which activate ( approximately x10(6)) the nitrile toward attack by nucleophiles such as ammonia and hydroxide. Amination with liquid ammonia gave a rare coordinated guanidine (N,N-dimethylguanidine) ligand, which NMR spectra and X-ray crystal structures show to be charge neutral rather than anionic. Crystals of [(NH(3))(5)CoNH=C(NH(2))NMe(2)](S(2)O(6))(3/2).H(2)O, CoC(3)H(26)N(8)O(10)S(3), were triclinic, space group P&onemacr;, a = 11.565(2) Å, b = 10.629(5) Å, c = 8.026(1) Å, alpha = 84.93(3) degrees, beta = 76.01(1) degrees, gamma = 73.82(3) degrees, V = 919.2(5) Å(3), Z = 2, and R(F)() (R(w)(F)()) = 0.038 (0.047) for 3262 observed reflections (I > 3.0 sigma(I)). Crystals of [(dien)PtNH=C(NH(2))NMe(2)](CF(3)SO(3))(2), PtC(9)H(22)N(6)O(6) S(2)F(6), are monoclinic, space group P2(1)/c, a = 13.857(4), b = 14.748(4) Å, c = 22.092(4) Å, beta = 105.38(2) degrees, V = 4353(2) Å(3), Z = 8, and R(F)() (R(w)(F)()) = 0.034 (0.038) for 6778 reflections. Coordination geometries around the metals are octahedral and square planar, respectively, the guanidine skeletons being planar with bond angles and lengths characteristic of the metal-imino (rather than metal-amino) tautomer. The complexes are very stable in coordinating solvents (DMSO; water, pH 3-11) indicating high affinity of guanidine ligands for metal ions. Hydration of the dimethylcyanamide ligand is base-catalyzed, and first-order in [OH(-)] (0.05-0.5 M NaOH; k = k(s) + k(OH)[OH(-)], k(OH) = 2-5 M(-)(1) s(-)(1), 25 degrees C), in each case producing coordinated N,N-dimethylurea ([dienPtNHCONMe(2)](+), [(NH(3))(5)CoNHCONMe(2)](2+), [(NH(3))(5)OsNHCONMe(2)](2+)). Hydration rates are surprizingly similar despite differing radial extensions of the metal d-orbitals, a finding consistent with their comparable polarizing powers but contrary to expectation from other work. The relevance of metal activation of nitriles to biological systems is discussed.

Entities:  

Year:  1997        PMID: 11669664     DOI: 10.1021/ic961138e

Source DB:  PubMed          Journal:  Inorg Chem        ISSN: 0020-1669            Impact factor:   5.165


  2 in total

1.  Crystal structure of biotin synthase, an S-adenosylmethionine-dependent radical enzyme.

Authors:  Frederick Berkovitch; Yvain Nicolet; Jason T Wan; Joseph T Jarrett; Catherine L Drennan
Journal:  Science       Date:  2004-01-02       Impact factor: 47.728

2.  cis-Dichlorido(dimethyl sulfoxide-κS)(N,N,N',N'-tetra-methyl-guanidine-κN'')platinum(II).

Authors:  Ivan I Eliseev; Nadezhda A Bokach; Matti Haukka; Irina A Golenya
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2013-01-19
  2 in total

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