Literature DB >> 14704425

Crystal structure of biotin synthase, an S-adenosylmethionine-dependent radical enzyme.

Frederick Berkovitch1, Yvain Nicolet, Jason T Wan, Joseph T Jarrett, Catherine L Drennan.   

Abstract

The crystal structure of biotin synthase from Escherichia coli in complex with S-adenosyl-L-methionine and dethiobiotin has been determined to 3.4 angstrom resolution. This structure addresses how "AdoMet radical" or "radical SAM" enzymes use Fe4S4 clusters and S-adenosyl-L-methionine to generate organic radicals. Biotin synthase catalyzes the radical-mediated insertion of sulfur into dethiobiotin to form biotin. The structure places the substrates between the Fe4S4 cluster, essential for radical generation, and the Fe2S2 cluster, postulated to be the source of sulfur, with both clusters in unprecedented coordination environments.

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Year:  2004        PMID: 14704425      PMCID: PMC1456065          DOI: 10.1126/science.1088493

Source DB:  PubMed          Journal:  Science        ISSN: 0036-8075            Impact factor:   47.728


  39 in total

1.  Mutagenesis of the proposed iron-sulfur cluster binding ligands in Escherichia coli biotin synthase.

Authors:  K S Hewitson; J E Baldwin; N M Shaw; P L Roach
Journal:  FEBS Lett       Date:  2000-01-28       Impact factor: 4.124

Review 2.  Radical mechanisms in adenosylmethionine- and adenosylcobalamin-dependent enzymatic reactions.

Authors:  P A Frey; G H Reed
Journal:  Arch Biochem Biophys       Date:  2000-10-01       Impact factor: 4.013

3.  The PLP-dependent biotin synthase from Escherichia coli: mechanistic studies.

Authors:  Sandrine Ollagnier-de-Choudens; Etienne Mulliez; Marc Fontecave
Journal:  FEBS Lett       Date:  2002-12-18       Impact factor: 4.124

4.  Biotin synthase mechanism: on the origin of sulphur.

Authors:  B T Bui; D Florentin; F Fournier; O Ploux; A Méjean; A Marquet
Journal:  FEBS Lett       Date:  1998-11-27       Impact factor: 4.124

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Journal:  J Am Chem Soc       Date:  2002-05-15       Impact factor: 15.419

6.  A study on the nickel II-famotidine complexes.

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Journal:  J Inorg Biochem       Date:  2002-11-11       Impact factor: 4.155

7.  Glutamate mutase from Clostridium cochlearium: the structure of a coenzyme B12-dependent enzyme provides new mechanistic insights.

Authors:  R Reitzer; K Gruber; G Jogl; U G Wagner; H Bothe; W Buckel; C Kratky
Journal:  Structure       Date:  1999-08-15       Impact factor: 5.006

Review 8.  The generation of 5'-deoxyadenosyl radicals by adenosylmethionine-dependent radical enzymes.

Authors:  Joseph T Jarrett
Journal:  Curr Opin Chem Biol       Date:  2003-04       Impact factor: 8.822

9.  How coenzyme B12 radicals are generated: the crystal structure of methylmalonyl-coenzyme A mutase at 2 A resolution.

Authors:  F Mancia; N H Keep; A Nakagawa; P F Leadlay; S McSweeney; B Rasmussen; P Bösecke; O Diat; P R Evans
Journal:  Structure       Date:  1996-03-15       Impact factor: 5.006

10.  Control of adenosylmethionine-dependent radical generation in biotin synthase: a kinetic and thermodynamic analysis of substrate binding to active and inactive forms of BioB.

Authors:  Natalia B Ugulava; Kendra K Frederick; Joseph T Jarrett
Journal:  Biochemistry       Date:  2003-03-11       Impact factor: 3.162

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  139 in total

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3.  The radical SAM enzyme AlbA catalyzes thioether bond formation in subtilosin A.

Authors:  Leif Flühe; Thomas A Knappe; Michael J Gattner; Antje Schäfer; Olaf Burghaus; Uwe Linne; Mohamed A Marahiel
Journal:  Nat Chem Biol       Date:  2012-02-26       Impact factor: 15.040

Review 4.  Structure-function relationships in [FeFe]-hydrogenase active site maturation.

Authors:  Yvain Nicolet; Juan C Fontecilla-Camps
Journal:  J Biol Chem       Date:  2012-03-02       Impact factor: 5.157

5.  Bioinformatic Identification of Novel Methyltransferases.

Authors:  Tanya Petrossian; Steven Clarke
Journal:  Epigenomics       Date:  2009-10-01       Impact factor: 4.778

6.  Uncovering the human methyltransferasome.

Authors:  Tanya C Petrossian; Steven G Clarke
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Review 7.  Metabolic remodeling in iron-deficient fungi.

Authors:  Caroline C Philpott; Sébastien Leidgens; Avery G Frey
Journal:  Biochim Biophys Acta       Date:  2012-01-27

Review 8.  Iron-sulfur protein folds, iron-sulfur chemistry, and evolution.

Authors:  Jacques Meyer
Journal:  J Biol Inorg Chem       Date:  2007-11-09       Impact factor: 3.358

9.  Post-translational modification of ribosomal proteins: structural and functional characterization of RimO from Thermotoga maritima, a radical S-adenosylmethionine methylthiotransferase.

Authors:  Simon Arragain; Ricardo Garcia-Serres; Geneviève Blondin; Thierry Douki; Martin Clemancey; Jean-Marc Latour; Farhad Forouhar; Helen Neely; Gaetano T Montelione; John F Hunt; Etienne Mulliez; Marc Fontecave; Mohamed Atta
Journal:  J Biol Chem       Date:  2009-12-09       Impact factor: 5.157

10.  Reconstitution of ThiC in thiamine pyrimidine biosynthesis expands the radical SAM superfamily.

Authors:  Abhishek Chatterjee; Yue Li; Yang Zhang; Tyler L Grove; Michael Lee; Carsten Krebs; Squire J Booker; Tadhg P Begley; Steven E Ealick
Journal:  Nat Chem Biol       Date:  2008-10-26       Impact factor: 15.040

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