Literature DB >> 11600453

Irresistible IRES. Attracting the translation machinery to internal ribosome entry sites.

S Vagner1, B Galy, S Pyronnet.   

Abstract

Studies on the control of eukaryotic translation initiation by a cap-independent recruitment of the 40S ribosomal subunit to internal messenger RNA sequences called internal ribosome entry sites (IRESs) have shown that these sequence elements are present in a growing list of viral and cellular RNAs. Here we discuss their prevalence, mechanisms whereby they may function and their uses in regulating gene expression.

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Year:  2001        PMID： 11600453      PMCID： PMC1084086          DOI： 10.1093/embo-reports/kve208

Source DB:  PubMed          Journal:  EMBO Rep        ISSN： 1469-221X            Impact factor:   8.807


  53 in total

Review 1.  Cell cycle-dependent translation initiation: IRES elements prevail.

Authors:  A B Sachs
Journal:  Cell       Date:  2000-04-28       Impact factor: 41.582

2.  Identification and characterization of a novel cell cycle-regulated internal ribosome entry site.

Authors:  S Cornelis; Y Bruynooghe; G Denecker; S Van Huffel; S Tinton; R Beyaert
Journal:  Mol Cell       Date:  2000-04       Impact factor: 17.970

3.  Identification of eukaryotic mRNAs that are translated at reduced cap binding complex eIF4F concentrations using a cDNA microarray.

Authors:  G Johannes; M S Carter; M B Eisen; P O Brown; P Sarnow
Journal:  Proc Natl Acad Sci U S A       Date:  1999-11-09       Impact factor: 11.205

4.  A new internal-ribosome-entry-site motif potentiates XIAP-mediated cytoprotection.

Authors:  M Holcik; C Lefebvre; C Yeh; T Chow; R G Korneluk
Journal:  Nat Cell Biol       Date:  1999-07       Impact factor: 28.824

5.  Analysis of the c-myc IRES; a potential role for cell-type specific trans-acting factors and the nuclear compartment.

Authors:  M Stoneley; T Subkhankulova; J P Le Quesne; M J Coldwell; C L Jopling; G J Belsham; A E Willis
Journal:  Nucleic Acids Res       Date:  2000-02-01       Impact factor: 16.971

6.  rRNA-complementarity in the 5' untranslated region of mRNA specifying the Gtx homeodomain protein: evidence that base- pairing to 18S rRNA affects translational efficiency.

Authors:  M C Hu; P Tranque; G M Edelman; V P Mauro
Journal:  Proc Natl Acad Sci U S A       Date:  1999-02-16       Impact factor: 11.205

7.  c-Myc protein synthesis is initiated from the internal ribosome entry segment during apoptosis.

Authors:  M Stoneley; S A Chappell; C L Jopling; M Dickens; M MacFarlane; A E Willis
Journal:  Mol Cell Biol       Date:  2000-02       Impact factor: 4.272

8.  A novel form of DAP5 protein accumulates in apoptotic cells as a result of caspase cleavage and internal ribosome entry site-mediated translation.

Authors:  S Henis-Korenblit; N L Strumpf; D Goldstaub; A Kimchi
Journal:  Mol Cell Biol       Date:  2000-01       Impact factor: 4.272

9.  Cell cycle regulation of hepatitis C virus internal ribosomal entry site-directed translation.

Authors:  M Honda; S Kaneko; E Matsushita; K Kobayashi; G A Abell; S M Lemon
Journal:  Gastroenterology       Date:  2000-01       Impact factor: 22.682

10.  Differential utilization of poly(rC) binding protein 2 in translation directed by picornavirus IRES elements.

Authors:  B L Walter; J H Nguyen; E Ehrenfeld; B L Semler
Journal:  RNA       Date:  1999-12       Impact factor: 4.942
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  97 in total

1.  Structural elements in the internal ribosome entry site of Plautia stali intestine virus responsible for binding with ribosomes.

Authors:  Takashi Nishiyama; Hiroshi Yamamoto; Norihiro Shibuya; Yoshinori Hatakeyama; Akira Hachimori; Toshio Uchiumi; Nobuhiko Nakashima
Journal:  Nucleic Acids Res       Date:  2003-05-01       Impact factor: 16.971

2.  Regulation of gene expression by internal ribosome entry sites or cryptic promoters: the eIF4G story.

Authors:  Baoguang Han; Jian-Ting Zhang
Journal:  Mol Cell Biol       Date:  2002-11       Impact factor: 4.272

3.  Inhibition of translation and induction of apoptosis by Bunyaviral nonstructural proteins bearing sequence similarity to reaper.

Authors:  Daniel A Colón-Ramos; Pablo M Irusta; Eugene C Gan; Michael R Olson; Jaewhan Song; Richard I Morimoto; Richard M Elliott; Mark Lombard; Robert Hollingsworth; J Marie Hardwick; Gary K Smith; Sally Kornbluth
Journal:  Mol Biol Cell       Date:  2003-07-11       Impact factor: 4.138

4.  Internal ribosome entry site-mediated translation of Smad5 in vivo: requirement for a nuclear event.

Authors:  Kazuko Shiroki; Chieko Ohsawa; Natuki Sugi; Motoaki Wakiyama; Kin-ichiro Miura; Manabu Watanabe; Yutaka Suzuki; Sumio Sugano
Journal:  Nucleic Acids Res       Date:  2002-07-01       Impact factor: 16.971

5.  IRESdb: the Internal Ribosome Entry Site database.

Authors:  Sophie Bonnal; Christel Boutonnet; Leonel Prado-Lourenço; Stéphan Vagner
Journal:  Nucleic Acids Res       Date:  2003-01-01       Impact factor: 16.971

6.  Simultaneous on/off regulation of transgenes located on a mammalian chromosome with Cre-expressing adenovirus and a mutant loxP.

Authors:  Saki Kondo; Aya Okuda; Hiromi Sato; Naoto Tachikawa; Miho Terashima; Yumi Kanegae; Izumu Saito
Journal:  Nucleic Acids Res       Date:  2003-07-15       Impact factor: 16.971

7.  Pharmacological-based translational induction of transgene expression in mammalian cells.

Authors:  Christel Boutonnet; Olivier Boijoux; Sandra Bernat; Abdelhakkim Kharrat; Gilles Favre; Jean-Charles Faye; Stéphan Vagner
Journal:  EMBO Rep       Date:  2004-06-11       Impact factor: 8.807

8.  Characterization of two distinct RNA domains that regulate translation of the Drosophila gypsy retroelement.

Authors:  Corinne Ronfort; Sylvain De Breyne; Virginie Sandrin; Jean-Luc Darlix; Théophile Ohlmann
Journal:  RNA       Date:  2004-03       Impact factor: 4.942

9.  The 5' untranslated region of protein kinase Cdelta directs translation by an internal ribosome entry segment that is most active in densely growing cells and during apoptosis.

Authors:  Bronwyn C Morrish; Martin G Rumsby
Journal:  Mol Cell Biol       Date:  2002-09       Impact factor: 4.272

10.  Tissue-specific replicating capacity of a chimeric poliovirus that carries the internal ribosome entry site of hepatitis C virus in a new mouse model transgenic for the human poliovirus receptor.

Authors:  Akiko Yanagiya; Seii Ohka; Noriyasu Hashida; Masahito Okamura; Choji Taya; Nobuhiko Kamoshita; Kuniko Iwasaki; Yukari Sasaki; Hiromichi Yonekawa; Akio Nomoto
Journal:  J Virol       Date:  2003-10       Impact factor: 5.103
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