Literature DB >> 12087169

Internal ribosome entry site-mediated translation of Smad5 in vivo: requirement for a nuclear event.

Kazuko Shiroki1, Chieko Ohsawa, Natuki Sugi, Motoaki Wakiyama, Kin-ichiro Miura, Manabu Watanabe, Yutaka Suzuki, Sumio Sugano.   

Abstract

Smad5 is thought to relay signals of the bone morphogenetic protein pathway. The 5' untranslated region (5'UTR) of human Smad5 mRNA is long, has the potential to form secondary structures and contains five AUG codons. Here we show that the 5'UTR of Smad5 contains an internal ribosome entry site (IRES) located within 100 nt of the 3' end of the 5'UTR. The Smad5 IRES was 4-8-fold more active than the poliovirus IRES in C2C12 cells, which have osteoblastic differentiation ability, but was 5-10-fold less active than the poliovirus IRES in 293T cells. When an in vitro transcript of a dicistronic Smad5 IRES construct was transfected into C2C12 cells, the Smad5 IRES was not able to stimulate the translation of the downstream cistron, although the cap-dependent translation of the upstream cistron was efficient. In contrast, the poliovirus IRES in a dicistronic in vitro transcript was able to stimulate the translation of the downstream cistron to a similar extent as in the case of transfection of the corresponding dicistronic DNA construct. These results suggest that Smad5 IRES activity displays cell specificity and that some as yet unidentified nuclear event may be required for efficient Smad5 IRES-driven translation initiation.

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Year:  2002        PMID: 12087169      PMCID: PMC117063          DOI: 10.1093/nar/gkf408

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  45 in total

Review 1.  Cell cycle-dependent translation initiation: IRES elements prevail.

Authors:  A B Sachs
Journal:  Cell       Date:  2000-04-28       Impact factor: 41.582

2.  Identification and characterization of a novel cell cycle-regulated internal ribosome entry site.

Authors:  S Cornelis; Y Bruynooghe; G Denecker; S Van Huffel; S Tinton; R Beyaert
Journal:  Mol Cell       Date:  2000-04       Impact factor: 17.970

3.  Distinct mRNAs that encode La autoantigen are differentially expressed and contain internal ribosome entry sites.

Authors:  M S Carter; P Sarnow
Journal:  J Biol Chem       Date:  2000-09-08       Impact factor: 5.157

4.  A new internal-ribosome-entry-site motif potentiates XIAP-mediated cytoprotection.

Authors:  M Holcik; C Lefebvre; C Yeh; T Chow; R G Korneluk
Journal:  Nat Cell Biol       Date:  1999-07       Impact factor: 28.824

5.  Analysis of the c-myc IRES; a potential role for cell-type specific trans-acting factors and the nuclear compartment.

Authors:  M Stoneley; T Subkhankulova; J P Le Quesne; M J Coldwell; C L Jopling; G J Belsham; A E Willis
Journal:  Nucleic Acids Res       Date:  2000-02-01       Impact factor: 16.971

6.  Initiation of Apaf-1 translation by internal ribosome entry.

Authors:  M J Coldwell; S A Mitchell; M Stoneley; M MacFarlane; A E Willis
Journal:  Oncogene       Date:  2000-02-17       Impact factor: 9.867

7.  c-Myc protein synthesis is initiated from the internal ribosome entry segment during apoptosis.

Authors:  M Stoneley; S A Chappell; C L Jopling; M Dickens; M MacFarlane; A E Willis
Journal:  Mol Cell Biol       Date:  2000-02       Impact factor: 4.272

8.  A novel form of DAP5 protein accumulates in apoptotic cells as a result of caspase cleavage and internal ribosome entry site-mediated translation.

Authors:  S Henis-Korenblit; N L Strumpf; D Goldstaub; A Kimchi
Journal:  Mol Cell Biol       Date:  2000-01       Impact factor: 4.272

9.  Transcription-coupled translation control of AML1/RUNX1 is mediated by cap- and internal ribosome entry site-dependent mechanisms.

Authors:  A Pozner; D Goldenberg; V Negreanu; S Y Le; O Elroy-Stein; D Levanon; Y Groner
Journal:  Mol Cell Biol       Date:  2000-04       Impact factor: 4.272

10.  A cell cycle-dependent internal ribosome entry site.

Authors:  S Pyronnet; L Pradayrol; N Sonenberg
Journal:  Mol Cell       Date:  2000-04       Impact factor: 17.970

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  15 in total

1.  A small yeast RNA inhibits HCV IRES mediated translation and inhibits replication of poliovirus in vivo.

Authors:  Xue-Song Liang; Jian-Qi Lian; Yong-Xing Zhou; Qing-He Nie; Chun-Qiu Hao
Journal:  World J Gastroenterol       Date:  2003-05       Impact factor: 5.742

Review 2.  Searching for IRES.

Authors:  Stephen D Baird; Marcel Turcotte; Robert G Korneluk; Martin Holcik
Journal:  RNA       Date:  2006-09-06       Impact factor: 4.942

3.  Secretome of human bone marrow mesenchymal stem cells: an emerging player in lung cancer progression and mechanisms of translation initiation.

Authors:  Oshrat Attar-Schneider; Victoria Zismanov; Liat Drucker; Maya Gottfried
Journal:  Tumour Biol       Date:  2015-10-30

4.  ATF2 translation is induced under chemotherapeutic drug-mediated cellular stress via an IRES-dependent mechanism in human hepatic cancer Bel7402 cells.

Authors:  Qi Li; Wen-Qing Gao; Wen-Yan Dai; Chuang Yu; Rui-Yu Zhu; Jian Jin
Journal:  Oncol Lett       Date:  2016-10-18       Impact factor: 2.967

5.  An internal ribosome entry site mediates translation of lymphoid enhancer factor-1.

Authors:  Judith Jimenez; Gwendolyn M Jang; Bert L Semler; Marian L Waterman
Journal:  RNA       Date:  2005-09       Impact factor: 4.942

Review 6.  The current status of vertebrate cellular mRNA IRESs.

Authors:  Richard J Jackson
Journal:  Cold Spring Harb Perspect Biol       Date:  2013-02-01       Impact factor: 10.005

7.  Migration and epithelial-to-mesenchymal transition of lung cancer can be targeted via translation initiation factors eIF4E and eIF4GI.

Authors:  Oshrat Attar-Schneider; Liat Drucker; Maya Gottfried
Journal:  Lab Invest       Date:  2016-08-08       Impact factor: 5.662

8.  Translational control of Scamper expression via a cell-specific internal ribosome entry site.

Authors:  Davide De Pietri Tonelli; Marija Mihailovich; Raphaela Schnurbus; Graziano Pesole; Fabio Grohovaz; Daniele Zacchetti
Journal:  Nucleic Acids Res       Date:  2003-05-15       Impact factor: 16.971

Review 9.  Current Practice in Bicistronic IRES Reporter Use: A Systematic Review.

Authors:  Guus Gijsbertus Hubert van den Akker; Federico Zacchini; Bas Adrianus Catharina Housmans; Laura van der Vloet; Marjolein Maria Johanna Caron; Lorenzo Montanaro; Tim Johannes Maria Welting
Journal:  Int J Mol Sci       Date:  2021-05-14       Impact factor: 5.923

10.  The dicistronic RNA from the mouse LINE-1 retrotransposon contains an internal ribosome entry site upstream of each ORF: implications for retrotransposition.

Authors:  Patrick Wai-Lun Li; Jinfang Li; Stephanie L Timmerman; Les A Krushel; Sandra L Martin
Journal:  Nucleic Acids Res       Date:  2006-02-06       Impact factor: 16.971

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