Literature DB >> 11583614

Composition and functional characterization of yeast 66S ribosome assembly intermediates.

P Harnpicharnchai1, J Jakovljevic, E Horsey, T Miles, J Roman, M Rout, D Meagher, B Imai, Y Guo, C J Brame, J Shabanowitz, D F Hunt, J L Woolford.   

Abstract

The pathway and complete collection of factors that orchestrate ribosome assembly are not clear. To address these problems, we affinity purified yeast preribosomal particles containing the nucleolar protein Nop7p and developed means to separate their components. Nop7p is associated primarily with 66S preribosomes containing either 27SB or 25.5S plus 7S pre-rRNAs. Copurifying proteins identified by mass spectrometry include ribosomal proteins, nonribosomal proteins previously implicated in 60S ribosome biogenesis, and proteins not known to be involved in ribosome production. Analysis of strains mutant for eight of these proteins not previously implicated in ribosome biogenesis showed that they do participate in this pathway. These results demonstrate that proteomic approaches in concert with genetic tools provide powerful means to purify and characterize ribosome assembly intermediates.

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Year:  2001        PMID: 11583614     DOI: 10.1016/s1097-2765(01)00344-6

Source DB:  PubMed          Journal:  Mol Cell        ISSN: 1097-2765            Impact factor:   17.970


  157 in total

1.  Nob1p is required for cleavage of the 3' end of 18S rRNA.

Authors:  Alessandro Fatica; Marlene Oeffinger; Mensur Dlakić; David Tollervey
Journal:  Mol Cell Biol       Date:  2003-03       Impact factor: 4.272

2.  Topological structure analysis of the protein-protein interaction network in budding yeast.

Authors:  Dongbo Bu; Yi Zhao; Lun Cai; Hong Xue; Xiaopeng Zhu; Hongchao Lu; Jingfen Zhang; Shiwei Sun; Lunjiang Ling; Nan Zhang; Guojie Li; Runsheng Chen
Journal:  Nucleic Acids Res       Date:  2003-05-01       Impact factor: 16.971

3.  60S pre-ribosome formation viewed from assembly in the nucleolus until export to the cytoplasm.

Authors:  Tracy A Nissan; Jochen Bassler; Elisabeth Petfalski; David Tollervey; Ed Hurt
Journal:  EMBO J       Date:  2002-10-15       Impact factor: 11.598

4.  Cic1p/Nsa3p is required for synthesis and nuclear export of 60S ribosomal subunits.

Authors:  Alessandro Fatica; Marlene Oeffinger; David Tollervey; Irene Bozzoni
Journal:  RNA       Date:  2003-12       Impact factor: 4.942

5.  Yeast Nop15p is an RNA-binding protein required for pre-rRNA processing and cytokinesis.

Authors:  Marlene Oeffinger; David Tollervey
Journal:  EMBO J       Date:  2003-12-15       Impact factor: 11.598

6.  NO66, a highly conserved dual location protein in the nucleolus and in a special type of synchronously replicating chromatin.

Authors:  Jens Eilbracht; Michaela Reichenzeller; Michaela Hergt; Martina Schnölzer; Hans Heid; Michael Stöhr; Werner W Franke; Marion S Schmidt-Zachmann
Journal:  Mol Biol Cell       Date:  2004-01-23       Impact factor: 4.138

7.  One-step affinity purification of the yeast ribosome and its associated proteins and mRNAs.

Authors:  Toshifumi Inada; Eric Winstall; Salvador Z Tarun; John R Yates; Dave Schieltz; Alan B Sachs
Journal:  RNA       Date:  2002-07       Impact factor: 4.942

8.  RNA polymerase I transcription and pre-rRNA processing are linked by specific SSU processome components.

Authors:  Jennifer E G Gallagher; David A Dunbar; Sander Granneman; Brianna M Mitchell; Yvonne Osheim; Ann L Beyer; Susan J Baserga
Journal:  Genes Dev       Date:  2004-10-15       Impact factor: 11.361

9.  Kap120 functions as a nuclear import receptor for ribosome assembly factor Rpf1 in yeast.

Authors:  Stefanie Caesar; Markus Greiner; Gabriel Schlenstedt
Journal:  Mol Cell Biol       Date:  2006-04       Impact factor: 4.272

10.  The Candida albicans pescadillo homolog is required for normal hypha-to-yeast morphogenesis and yeast proliferation.

Authors:  Junqing Shen; Leah E Cowen; April M Griffin; Leon Chan; Julia R Köhler
Journal:  Proc Natl Acad Sci U S A       Date:  2008-12-15       Impact factor: 11.205

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