Literature DB >> 11563914

Structural and functional linkages between subunit interfaces in mammalian pyruvate kinase.

J O Wooll1, R H Friesen, M A White, S J Watowich, R O Fox, J C Lee, E W Czerwinski.   

Abstract

Mammalian pyruvate kinase (PK) is a four-domain enzyme that is active as a homo-tetramer. Tissue-specific isozymes of PK exhibit distinct levels of allosteric regulation. PK expressed in muscle tissue (M1-PK) shows hyperbolic steady-state kinetics, whereas PK expressed in kidney tissue (M2-PK) displays sigmoidal kinetics. Rabbit M1 and M2-PK are isozymes whose sequences differ in only 22 out of 530 residues per subunit, and these changes are localized in an inter-subunit interface. Previous studies have shown that a single amino acid mutation to M1-PK at either the Y (S402P) or Z (T340 M) subunit interface can confer a level of allosteric regulation that is intermediate to M1-PK and M2-PK. In an effort to elucidate the roles of the inter-subunit interaction in signal transmission and the functional/structural connectivity between these interfaces, the S402P mutant of M1-PK was crystallized and its structure resolved to 2.8 A. Although the overall S402P M1-PK structure is nearly identical with the wild-type structure within experimental error, significant differences in the conformation of the backbone are found at the site of mutation along the Y interface. In addition, there is a significant change along the Z interface, namely, a loss of an inter-subunit salt-bridge between Asp177 of domain B and Arg341 of domain A of the opposing subunit. Concurrent with the loss of the salt-bridge is an increase in the degree of rotational flexibility of domain B that constitutes the active site. Comparison of previous PK structures shows a correlation between an increase in this domain movement with the loss of the Asp177: Arg341 salt-bridge. These results identify the structural linkages between the Y and Z interfaces in regulating the interconversion of conformational states of rabbit M1-PK. Copyright 2001 Academic Press.

Entities:  

Mesh:

Substances:

Year:  2001        PMID: 11563914     DOI: 10.1006/jmbi.2001.4978

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  13 in total

1.  A Molecular Dynamics Study of Allosteric Transitions in Leishmania mexicana Pyruvate Kinase.

Authors:  Ankita Naithani; Paul Taylor; Burak Erman; Malcolm D Walkinshaw
Journal:  Biophys J       Date:  2015-07-22       Impact factor: 4.033

2.  First-Principles Collision Cross Section Measurements of Large Proteins and Protein Complexes.

Authors:  Jacob W McCabe; Christopher S Mallis; Klaudia I Kocurek; Michael L Poltash; Mehdi Shirzadeh; Michael J Hebert; Liqi Fan; Thomas E Walker; Xueyun Zheng; Ting Jiang; Shiyu Dong; Cheng-Wei Lin; Arthur Laganowsky; David H Russell
Journal:  Anal Chem       Date:  2020-07-28       Impact factor: 6.986

3.  Identification of regions of rabbit muscle pyruvate kinase important for allosteric regulation by phenylalanine, detected by H/D exchange mass spectrometry.

Authors:  Charulata B Prasannan; Maria T Villar; Antonio Artigues; Aron W Fenton
Journal:  Biochemistry       Date:  2013-03-06       Impact factor: 3.162

4.  Distinguishing the chemical moiety of phosphoenolpyruvate that contributes to allostery in muscle pyruvate kinase.

Authors:  James M Urness; Kelly M Clapp; J Cody Timmons; Xinyan Bai; Nalin Chandrasoma; Keith R Buszek; Aron W Fenton
Journal:  Biochemistry       Date:  2012-12-24       Impact factor: 3.162

5.  Addressing the diagnostic gaps in pyruvate kinase deficiency: Consensus recommendations on the diagnosis of pyruvate kinase deficiency.

Authors:  Paola Bianchi; Elisa Fermo; Bertil Glader; Hitoshi Kanno; Archana Agarwal; Wilma Barcellini; Stefan Eber; James D Hoyer; David J Kuter; Tabita Magalhães Maia; Maria Del Mar Mañu-Pereira; Theodosia A Kalfa; Serge Pissard; José-Carlos Segovia; Eduard van Beers; Patrick G Gallagher; David C Rees; Richard van Wijk
Journal:  Am J Hematol       Date:  2018-11-28       Impact factor: 10.047

6.  Functional energetic landscape in the allosteric regulation of muscle pyruvate kinase. 1. Calorimetric study.

Authors:  Petr Herman; J Ching Lee
Journal:  Biochemistry       Date:  2009-10-13       Impact factor: 3.162

7.  Functional energetic landscape in the allosteric regulation of muscle pyruvate kinase. 2. Fluorescence study.

Authors:  Petr Herman; J Ching Lee
Journal:  Biochemistry       Date:  2009-10-13       Impact factor: 3.162

8.  Differential behavior of missense mutations in the intersubunit contact domain of the human pyruvate kinase M2 isozyme.

Authors:  Kamal Akhtar; Vibhor Gupta; Anita Koul; Neelima Alam; Rajiv Bhat; Rameshwar N K Bamezai
Journal:  J Biol Chem       Date:  2009-03-05       Impact factor: 5.157

Review 9.  Modulation of allostery of pyruvate kinase by shifting of an ensemble of microstates.

Authors:  J Ching Lee
Journal:  Acta Biochim Biophys Sin (Shanghai)       Date:  2008-07       Impact factor: 3.848

10.  Robotically assisted titration coupled to ion mobility-mass spectrometry reveals the interface structures and analysis parameters critical for multiprotein topology mapping.

Authors:  Yueyang Zhong; Jun Feng; Brandon T Ruotolo
Journal:  Anal Chem       Date:  2013-11-11       Impact factor: 6.986

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.