Literature DB >> 11509340

Viscoelastic dynamics of actin filaments coupled to rotary F-ATPase: curvature as an indicator of the torque.

D A Cherepanov1, W Junge.   

Abstract

ATP synthase (F-ATPase) operates as an electrochemical-to-mechanical-to-chemical energy transducer with an astounding 360 degrees rotary motion of subunits epsilongammac(10-14) (rotor) against delta(alphabeta)(3)ab(2) (stator). The enzyme's torque as a function of the angular reaction coordinate in relation to ATP-synthesis/hydrolysis, internal elasticity, and external load has remained an important issue. Fluorescent actin filaments of micrometer length have been used to detect the rotation as driven by ATP hydrolysis. We evaluated the viscoelastic dynamics of actin filaments under the influence of enzyme-generated torque, stochastic Langevin force, and viscous drag. Modeling with realistic parameters revealed the dominance of the lowest normal mode. Because of its slow relaxation (approximately 100 ms), power strokes of the enzyme were expected to appear strongly damped in recordings of the angular velocity of the filament. This article describes the theoretical background for the alternative use of the filament as a spring balance. The enzyme's angular torque profile under load can be gauged by measuring the average curvature and the stochastic fluctuations of actin filaments. Pertinent experiments were analyzed in the companion paper.

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Year:  2001        PMID: 11509340      PMCID: PMC1301605          DOI: 10.1016/S0006-3495(01)75781-5

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  30 in total

1.  Stepping rotation of F1-ATPase visualized through angle-resolved single-fluorophore imaging.

Authors:  K Adachi; R Yasuda; H Noji; H Itoh; Y Harada; M Yoshida; K Kinosita
Journal:  Proc Natl Acad Sci U S A       Date:  2000-06-20       Impact factor: 11.205

Review 2.  ATP synthase: two motors, two fuels.

Authors:  G Oster; H Wang
Journal:  Structure       Date:  1999-04-15       Impact factor: 5.006

Review 3.  The structure of bovine mitochondrial F1-ATPase: an example of rotary catalysis.

Authors:  A G Leslie; J P Abrahams; K Braig; R Lutter; R I Menz; G L Orriss; M J van Raaij; J E Walker
Journal:  Biochem Soc Trans       Date:  1999-02       Impact factor: 5.407

4.  Viscoelastic dynamics of actin filaments coupled to rotary F-ATPase: angular torque profile of the enzyme.

Authors:  O Pänke; D A Cherepanov; K Gumbiowski; S Engelbrecht; W Junge
Journal:  Biophys J       Date:  2001-09       Impact factor: 4.033

Review 5.  ATP synthase: an electrochemical transducer with rotatory mechanics.

Authors:  W Junge; H Lill; S Engelbrecht
Journal:  Trends Biochem Sci       Date:  1997-11       Impact factor: 13.807

6.  Three-stepped rotation of subunits gamma and epsilon in single molecules of F-ATPase as revealed by polarized, confocal fluorometry.

Authors:  K Häsler; S Engelbrecht; W Junge
Journal:  FEBS Lett       Date:  1998-04-24       Impact factor: 4.124

Review 7.  F1-ATPase: a rotary motor made of a single molecule.

Authors:  K Kinosita; R Yasuda; H Noji; S Ishiwata; M Yoshida
Journal:  Cell       Date:  1998-04-03       Impact factor: 41.582

8.  Mechanical rotation of the c subunit oligomer in ATP synthase (F0F1): direct observation.

Authors:  Y Sambongi; Y Iko; M Tanabe; H Omote; A Iwamoto-Kihara; I Ueda; T Yanagida; Y Wada; M Futai
Journal:  Science       Date:  1999-11-26       Impact factor: 47.728

9.  Direct observation of motion of single F-actin filaments in the presence of myosin.

Authors:  T Yanagida; M Nakase; K Nishiyama; F Oosawa
Journal:  Nature       Date:  1984 Jan 5-11       Impact factor: 49.962

10.  F-ATPase: specific observation of the rotating c subunit oligomer of EF(o)EF(1).

Authors:  O Pänke; K Gumbiowski; W Junge; S Engelbrecht
Journal:  FEBS Lett       Date:  2000-04-21       Impact factor: 4.124

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  15 in total

1.  Viscoelastic dynamics of actin filaments coupled to rotary F-ATPase: angular torque profile of the enzyme.

Authors:  O Pänke; D A Cherepanov; K Gumbiowski; S Engelbrecht; W Junge
Journal:  Biophys J       Date:  2001-09       Impact factor: 4.033

2.  The proton-driven rotor of ATP synthase: ohmic conductance (10 fS), and absence of voltage gating.

Authors:  Boris A Feniouk; Maria A Kozlova; Dmitry A Knorre; Dmitry A Cherepanov; Armen Y Mulkidjanian; Wolfgang Junge
Journal:  Biophys J       Date:  2004-06       Impact factor: 4.033

3.  Protons, proteins and ATP.

Authors:  Wolfgang Junge
Journal:  Photosynth Res       Date:  2004       Impact factor: 3.573

4.  Functional halt positions of rotary FOF1-ATPase correlated with crystal structures.

Authors:  Hendrik Sielaff; Henning Rennekamp; Siegfried Engelbrecht; Wolfgang Junge
Journal:  Biophys J       Date:  2008-08-22       Impact factor: 4.033

5.  Domain compliance and elastic power transmission in rotary F(O)F(1)-ATPase.

Authors:  Hendrik Sielaff; Henning Rennekamp; André Wächter; Hao Xie; Florian Hilbers; Katrin Feldbauer; Stanley D Dunn; Siegfried Engelbrecht; Wolfgang Junge
Journal:  Proc Natl Acad Sci U S A       Date:  2008-11-10       Impact factor: 11.205

6.  Catalysis-enhancement via rotary fluctuation of F1-ATPase.

Authors:  Rikiya Watanabe; Kumiko Hayashi; Hiroshi Ueno; Hiroyuki Noji
Journal:  Biophys J       Date:  2013-11-19       Impact factor: 4.033

7.  Torque transmission mechanism via DELSEED loop of F1-ATPase.

Authors:  Rikiya Watanabe; Kazuma Koyasu; Huijuan You; Mizue Tanigawara; Hiroyuki Noji
Journal:  Biophys J       Date:  2015-03-10       Impact factor: 4.033

8.  Mechanical modulation of ATP-binding affinity of V1-ATPase.

Authors:  Naciye Esma Tirtom; Daichi Okuno; Masahiro Nakano; Ken Yokoyama; Hiroyuki Noji
Journal:  J Biol Chem       Date:  2012-11-15       Impact factor: 5.157

9.  Robustness of the rotary catalysis mechanism of F1-ATPase.

Authors:  Rikiya Watanabe; Yuki Matsukage; Ayako Yukawa; Kazuhito V Tabata; Hiroyuki Noji
Journal:  J Biol Chem       Date:  2014-05-29       Impact factor: 5.157

10.  Single molecule measurements of F1-ATPase reveal an interdependence between the power stroke and the dwell duration.

Authors:  David Spetzler; Robert Ishmukhametov; Tassilo Hornung; Lixia Jin Day; James Martin; Wayne D Frasch
Journal:  Biochemistry       Date:  2009-08-25       Impact factor: 3.162

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