Literature DB >> 11483971

DNA microarrays and beyond: completing the journey from tissue to cell.

J C Mills1, K A Roth, R L Cagan, J I Gordon.   

Abstract

For the cell biologist, identifying changes in gene expression using DNA microarrays is just the start of a long journey from tissue to cell. We discuss how chip users can first filter noise (false-positives) from daunting microarray datasets. Combining laser capture microdissection with real-time polymerase chain reaction and reverse transcription is a helpful follow-up step that allows expression of selected genes to be quantified using sensitive new in situ hybridization and immunohistochemical methods based on tyramide signal amplification.

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Year:  2001        PMID: 11483971     DOI: 10.1038/35087108

Source DB:  PubMed          Journal:  Nat Cell Biol        ISSN: 1465-7392            Impact factor:   28.824


  25 in total

1.  Detecting spatial patterns in biological array experiments.

Authors:  David E Root; Brian P Kelley; Brent R Stockwell
Journal:  J Biomol Screen       Date:  2003-08

2.  Differential display: a critical analysis.

Authors:  Dana R Crawford; John C Kochheiser; Gary P Schools; Sharon L Salmon; Kelvin J A Davies
Journal:  Gene Expr       Date:  2002

3.  SAGE Genie: a suite with panoramic view of gene expression.

Authors:  Peng Liang
Journal:  Proc Natl Acad Sci U S A       Date:  2002-08-23       Impact factor: 11.205

Review 4.  Global analysis of large-scale chemical and biological experiments.

Authors:  David E Root; Brian P Kelley; Brent R Stockwell
Journal:  Curr Opin Drug Discov Devel       Date:  2002-05

5.  Single primer amplification (SPA) of cDNA for microarray expression analysis.

Authors:  Lee Smith; Peter Underhill; Clare Pritchard; Zuzanna Tymowska-Lalanne; Saba Abdul-Hussein; Helen Hilton; Laura Winchester; Deborah Williams; Tom Freeman; Sarah Webb; Andy Greenfield
Journal:  Nucleic Acids Res       Date:  2003-02-01       Impact factor: 16.971

6.  Improved quantitative real-time RT-PCR for expression profiling of individual cells.

Authors:  Birgit Liss
Journal:  Nucleic Acids Res       Date:  2002-09-01       Impact factor: 16.971

7.  Global analysis of gene expression by differential display: a mathematical model.

Authors:  Shitao Yang; Peng Liang
Journal:  Mol Biotechnol       Date:  2004-07       Impact factor: 2.695

8.  The bHLH domain of Mistl is sufficient to activate gene transcription.

Authors:  Thai Tran; Di Jia; Yan Sun; Stephen F Konieczny
Journal:  Gene Expr       Date:  2007

9.  Genes expressed in zoospores of Phytophthora nicotianae.

Authors:  D Skalamera; A P Wasson; A R Hardham
Journal:  Mol Genet Genomics       Date:  2003-12-03       Impact factor: 3.291

10.  Molecular mechanisms underlying hypothermia-induced neuroprotection.

Authors:  Yasushi Shintani; Yasuko Terao; Hiroyuki Ohta
Journal:  Stroke Res Treat       Date:  2010-12-01
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