Literature DB >> 11483530

Excision of deaminated cytosine from the vertebrate genome: role of the SMUG1 uracil-DNA glycosylase.

H Nilsen1, K A Haushalter, P Robins, D E Barnes, G L Verdine, T Lindahl.   

Abstract

Gene-targeted mice deficient in the evolutionarily conserved uracil-DNA glycosylase encoded by the UNG gene surprisingly lack the mutator phenotype characteristic of bacterial and yeast ung(-) mutants. A complementary uracil-DNA glycosylase activity detected in ung(-/-) murine cells and tissues may be responsible for the repair of deaminated cytosine residues in vivo. Here, specific neutralizing antibodies were used to identify the SMUG1 enzyme as the major uracil-DNA glycosylase in UNG-deficient mice. SMUG1 is present at similar levels in cell nuclei of non-proliferating and proliferating tissues, indicating a replication- independent role in DNA repair. The SMUG1 enzyme is found in vertebrates and insects, whereas it is absent in nematodes, plants and fungi. We propose a model in which SMUG1 has evolved in higher eukaryotes as an anti-mutator distinct from the UNG enzyme, the latter being largely localized to replication foci in mammalian cells to counteract de novo dUMP incorporation into DNA.

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Year:  2001        PMID: 11483530      PMCID: PMC149160          DOI: 10.1093/emboj/20.15.4278

Source DB:  PubMed          Journal:  EMBO J        ISSN: 0261-4189            Impact factor:   11.598


  36 in total

1.  DNA-bound structures and mutants reveal abasic DNA binding by APE1 and DNA repair coordination [corrected].

Authors:  C D Mol; T Izumi; S Mitra; J A Tainer
Journal:  Nature       Date:  2000-01-27       Impact factor: 49.962

2.  Separating substrate recognition from base hydrolysis in human thymine DNA glycosylase by mutational analysis.

Authors:  U Hardeland; M Bentele; J Jiricny; P Schär
Journal:  J Biol Chem       Date:  2000-10-27       Impact factor: 5.157

3.  Human homolog of the MutY repair protein (hMYH) physically interacts with proteins involved in long patch DNA base excision repair.

Authors:  A Parker; Y Gu; W Mahoney; S H Lee; K K Singh; A L Lu
Journal:  J Biol Chem       Date:  2000-11-22       Impact factor: 5.157

4.  Human thymine DNA glycosylase binds to apurinic sites in DNA but is displaced by human apurinic endonuclease 1.

Authors:  T R Waters; P Gallinari; J Jiricny; P F Swann
Journal:  J Biol Chem       Date:  1999-01-01       Impact factor: 5.157

5.  Post-replicative base excision repair in replication foci.

Authors:  M Otterlei; E Warbrick; T A Nagelhus; T Haug; G Slupphaug; M Akbari; P A Aas; K Steinsbekk; O Bakke; H E Krokan
Journal:  EMBO J       Date:  1999-07-01       Impact factor: 11.598

6.  Enhanced activity of adenine-DNA glycosylase (Myh) by apurinic/apyrimidinic endonuclease (Ape1) in mammalian base excision repair of an A/GO mismatch.

Authors:  H Yang; W M Clendenin; D Wong; B Demple; M M Slupska; J H Chiang; J H Miller
Journal:  Nucleic Acids Res       Date:  2001-02-01       Impact factor: 16.971

7.  The thymine glycosylase MBD4 can bind to the product of deamination at methylated CpG sites.

Authors:  B Hendrich; U Hardeland; H H Ng; J Jiricny; A Bird
Journal:  Nature       Date:  1999-09-16       Impact factor: 49.962

8.  Stimulation of human 8-oxoguanine-DNA glycosylase by AP-endonuclease: potential coordination of the initial steps in base excision repair.

Authors:  J W Hill; T K Hazra; T Izumi; S Mitra
Journal:  Nucleic Acids Res       Date:  2001-01-15       Impact factor: 16.971

9.  Uracil-DNA glycosylase (UNG)-deficient mice reveal a primary role of the enzyme during DNA replication.

Authors:  H Nilsen; I Rosewell; P Robins; C F Skjelbred; S Andersen; G Slupphaug; G Daly; H E Krokan; T Lindahl; D E Barnes
Journal:  Mol Cell       Date:  2000-06       Impact factor: 17.970

10.  Identification of a new uracil-DNA glycosylase family by expression cloning using synthetic inhibitors.

Authors:  K A Haushalter; M W Todd Stukenberg; M W Kirschner; G L Verdine
Journal:  Curr Biol       Date:  1999-02-25       Impact factor: 10.834

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  66 in total

1.  Mismatch repair in methylated DNA. Structure and activity of the mismatch-specific thymine glycosylase domain of methyl-CpG-binding protein MBD4.

Authors:  Peiying Wu; Chen Qiu; Anjum Sohail; Xing Zhang; Ashok S Bhagwat; Xiaodong Cheng
Journal:  J Biol Chem       Date:  2002-11-26       Impact factor: 5.157

2.  DNA base excision repair of uracil residues in reconstituted nucleosome core particles.

Authors:  Hilde Nilsen; Tomas Lindahl; Alain Verreault
Journal:  EMBO J       Date:  2002-11-01       Impact factor: 11.598

3.  Repair of U/G and U/A in DNA by UNG2-associated repair complexes takes place predominantly by short-patch repair both in proliferating and growth-arrested cells.

Authors:  Mansour Akbari; Marit Otterlei; Javier Peña-Diaz; Per Arne Aas; Bodil Kavli; Nina B Liabakk; Lars Hagen; Kohsuke Imai; Anne Durandy; Geir Slupphaug; Hans E Krokan
Journal:  Nucleic Acids Res       Date:  2004-10-12       Impact factor: 16.971

4.  Phylogenomic analysis of the uracil-DNA glycosylase superfamily.

Authors:  J Ignacio Lucas-Lledó; Rohan Maddamsetti; Michael Lynch
Journal:  Mol Biol Evol       Date:  2010-12-06       Impact factor: 16.240

5.  Steady-state, pre-steady-state, and single-turnover kinetic measurement for DNA glycosylase activity.

Authors:  Akira Sassa; William A Beard; David D Shock; Samuel H Wilson
Journal:  J Vis Exp       Date:  2013-08-19       Impact factor: 1.355

6.  Identification of a prototypical single-stranded uracil DNA glycosylase from Listeria innocua.

Authors:  Jing Li; Ye Yang; Jose Guevara; Liangjiang Wang; Weiguo Cao
Journal:  DNA Repair (Amst)       Date:  2017-07-08

Review 7.  Evaluation of molecular models for the affinity maturation of antibodies: roles of cytosine deamination by AID and DNA repair.

Authors:  Mala Samaranayake; Janusz M Bujnicki; Michael Carpenter; Ashok S Bhagwat
Journal:  Chem Rev       Date:  2006-02       Impact factor: 60.622

8.  Mechanisms of base selection by the Escherichia coli mispaired uracil glycosylase.

Authors:  Pingfang Liu; Jacob A Theruvathu; Agus Darwanto; Victoria Valinluck Lao; Tod Pascal; William Goddard; Lawrence C Sowers
Journal:  J Biol Chem       Date:  2008-01-20       Impact factor: 5.157

9.  Expression of the human DNA glycosylase hSMUG1 in Trypanosoma brucei causes DNA damage and interferes with J biosynthesis.

Authors:  Sebastian Ulbert; Mike Cross; Robert J Boorstein; George W Teebor; Piet Borst
Journal:  Nucleic Acids Res       Date:  2002-09-15       Impact factor: 16.971

10.  Arabidopsis uracil DNA glycosylase (UNG) is required for base excision repair of uracil and increases plant sensitivity to 5-fluorouracil.

Authors:  Dolores Córdoba-Cañero; Emeline Dubois; Rafael R Ariza; Marie-Pascale Doutriaux; Teresa Roldán-Arjona
Journal:  J Biol Chem       Date:  2010-01-07       Impact factor: 5.157

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