Literature DB >> 11474017

Automated multiplex assay system for simultaneous detection of hepatitis B virus DNA, hepatitis C virus RNA, and human immunodeficiency virus type 1 RNA.

Q Meng1, C Wong, A Rangachari, S Tamatsukuri, M Sasaki, E Fiss, L Cheng, T Ramankutty, D Clarke, H Yawata, Y Sakakura, T Hirose, C Impraim.   

Abstract

We have developed an automated multiplex system for simultaneously screening hepatitis B virus (HBV), hepatitis C virus (HCV), and human immunodeficiency virus type 1 (HIV-1) in blood donations. The assay, designated AMPLINAT MPX HBV/HCV/HIV-1 Test (AMPLINAT MPX), consists of virus extraction and target sequence-specific probe capture on specimen preparation workstation GT-X (Roche Diagnostics K.K., Tokyo, Japan) and amplification and detection by TaqMan PCR on the ABI PRISM 7700 Analyzer (Perkin-Elmer Applied Biosystems, Foster City, Calif.). An internal control (IC) is incorporated in the assay to monitor the extraction, target amplification, and detection processes. The assay yields qualitative results without discrimination of the three targets. Detection limits (95% confidence interval) are 22 to 60 copies/ml for HBV, 61 to 112 IU/ml for HCV, and 33 to 66 copies/ml for HIV-1, using a specimen input volume of 0.2 ml. The AMPLINAT MPX assay detects a broad range of genotypes or subtypes for all three viruses and has a specificity of 99.6% for all three viruses with seronegative specimens. In an evaluation of seroconversion panels, the AMPLINAT MPX assay detects HBV infection an average of 24 days before the detection of HBsAg by enzyme immunoassay. HCV RNA was detected an average of 31 days before HCV antibody. HIV-1 RNA was detected an average of 14 days before HIV-1 antibody and an average of 9 days before p24 antigen. The Japanese Red Cross has been evaluating the AMPLINAT MPX system since October 1999. The clinical performance indicates that the AMPLINAT MPX system is robust, sensitive, and reproducible, with a high percentage of valid assay runs (96.8%), a low false-positive rate (0.34%), and a low IC failure rate (0.24%).

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Year:  2001        PMID: 11474017      PMCID: PMC88264          DOI: 10.1128/JCM.39.8.2937-2945.2001

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN: 0095-1137            Impact factor:   5.948


  21 in total

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Authors:  K Otake; K Nishioka
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2.  Multiplex detection of four pathogenic retroviruses using molecular beacons.

Authors:  J A Vet; A R Majithia; S A Marras; S Tyagi; S Dube; B J Poiesz; F R Kramer
Journal:  Proc Natl Acad Sci U S A       Date:  1999-05-25       Impact factor: 11.205

Review 3.  Hepatitis B virus biology.

Authors:  C Seeger; W S Mason
Journal:  Microbiol Mol Biol Rev       Date:  2000-03       Impact factor: 11.056

4.  Avoidance of PCR false positives [corrected].

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Journal:  Nature       Date:  1990-03-15       Impact factor: 49.962

5.  Automated specific capture of hepatitis C virus RNA with probes and paramagnetic particle separation.

Authors:  H Miyachi; A Masukawa; T Ohshima; T Hirose; C Impraim; Y Ando
Journal:  J Clin Microbiol       Date:  2000-01       Impact factor: 5.948

6.  Avoiding false positives with PCR.

Authors:  S Kwok; R Higuchi
Journal:  Nature       Date:  1989-05-18       Impact factor: 49.962

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Authors: 
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Authors:  S C Lee; A Antony; N Lee; J Leibow; J Q Yang; S Soviero; K Gutekunst; M Rosenstraus
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9.  Simultaneous detection of multiplex-amplified human immunodeficiency virus type 1 RNA, hepatitis C virus RNA, and hepatitis B virus DNA using a flow cytometer microsphere-based hybridization assay.

Authors:  J P Defoort; M Martin; B Casano; S Prato; C Camilla; V Fert
Journal:  J Clin Microbiol       Date:  2000-03       Impact factor: 5.948

10.  Simultaneous amplification and detection of specific DNA sequences.

Authors:  R Higuchi; G Dollinger; P S Walsh; R Griffith
Journal:  Biotechnology (N Y)       Date:  1992-04
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Review 6.  Multiplex qPCR for serodetection and serotyping of hepatitis viruses: A brief review.

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9.  Rapid detection of methicillin-resistant Staphylococcus aureus directly from sterile or nonsterile clinical samples by a new molecular assay.

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10.  Evaluation of a TaqMan PCR assay to detect rabies virus RNA: influence of sequence variation and application to quantification of viral loads.

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Journal:  J Clin Microbiol       Date:  2004-01       Impact factor: 5.948

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