Literature DB >> 11459978

Interaction of the beta sliding clamp with MutS, ligase, and DNA polymerase I.

F J López de Saro1, M O'Donnell.   

Abstract

The beta and proliferating cell nuclear antigen (PCNA) sliding clamps were first identified as components of their respective replicases, and thus were assigned a role in chromosome replication. Further studies have shown that the eukaryotic clamp, PCNA, interacts with several other proteins that are involved in excision repair, mismatch repair, cellular regulation, and DNA processing, indicating a much wider role than replication alone. Indeed, the Escherichia coli beta clamp is known to function with DNA polymerases II and V, indicating that beta also interacts with more than just the chromosomal replicase, DNA polymerase III. This report demonstrates three previously undetected protein-protein interactions with the beta clamp. Thus, beta interacts with MutS, DNA ligase, and DNA polymerase I. Given the diverse use of these proteins in repair and other DNA transactions, this expanded list of beta interactive proteins suggests that the prokaryotic beta ring participates in a wide variety of reactions beyond its role in chromosomal replication.

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Year:  2001        PMID: 11459978      PMCID: PMC37446          DOI: 10.1073/pnas.121009498

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  37 in total

1.  Three-dimensional structure of the beta subunit of E. coli DNA polymerase III holoenzyme: a sliding DNA clamp.

Authors:  X P Kong; R Onrust; M O'Donnell; J Kuriyan
Journal:  Cell       Date:  1992-05-01       Impact factor: 41.582

Review 2.  Prokaryotic DNA replication.

Authors:  K J Marians
Journal:  Annu Rev Biochem       Date:  1992       Impact factor: 23.643

3.  Mechanism of the sliding beta-clamp of DNA polymerase III holoenzyme.

Authors:  P T Stukenberg; P S Studwell-Vaughan; M O'Donnell
Journal:  J Biol Chem       Date:  1991-06-15       Impact factor: 5.157

4.  Transcriptional activation by a DNA-tracking protein: structural consequences of enhancement at the T4 late promoter.

Authors:  R L Tinker; K P Williams; G A Kassavetis; E P Geiduschek
Journal:  Cell       Date:  1994-04-22       Impact factor: 41.582

5.  An explanation for lagging strand replication: polymerase hopping among DNA sliding clamps.

Authors:  P T Stukenberg; J Turner; M O'Donnell
Journal:  Cell       Date:  1994-09-09       Impact factor: 41.582

6.  Involvement of escherichia coli dnaZ gene product in DNA elongation in vitro.

Authors:  S Wickner; J Hurwitz
Journal:  Proc Natl Acad Sci U S A       Date:  1976-04       Impact factor: 11.205

7.  DNA mismatch correction in a defined system.

Authors:  R S Lahue; K G Au; P Modrich
Journal:  Science       Date:  1989-07-14       Impact factor: 47.728

8.  Processive DNA synthesis by DNA polymerase II mediated by DNA polymerase III accessory proteins.

Authors:  C A Bonner; P T Stukenberg; M Rajagopalan; R Eritja; M O'Donnell; K McEntee; H Echols; M F Goodman
Journal:  J Biol Chem       Date:  1992-06-05       Impact factor: 5.157

9.  Cdk-interacting protein 1 directly binds with proliferating cell nuclear antigen and inhibits DNA replication catalyzed by the DNA polymerase delta holoenzyme.

Authors:  H Flores-Rozas; Z Kelman; F B Dean; Z Q Pan; J W Harper; S J Elledge; M O'Donnell; J Hurwitz
Journal:  Proc Natl Acad Sci U S A       Date:  1994-08-30       Impact factor: 11.205

10.  The p21 inhibitor of cyclin-dependent kinases controls DNA replication by interaction with PCNA.

Authors:  S Waga; G J Hannon; D Beach; B Stillman
Journal:  Nature       Date:  1994-06-16       Impact factor: 49.962

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  82 in total

Review 1.  DNA replication meets genetic exchange: chromosomal damage and its repair by homologous recombination.

Authors:  A Kuzminov
Journal:  Proc Natl Acad Sci U S A       Date:  2001-07-17       Impact factor: 11.205

Review 2.  Managing DNA polymerases: coordinating DNA replication, DNA repair, and DNA recombination.

Authors:  M D Sutton; G C Walker
Journal:  Proc Natl Acad Sci U S A       Date:  2001-07-17       Impact factor: 11.205

3.  The processivity factor beta controls DNA polymerase IV traffic during spontaneous mutagenesis and translesion synthesis in vivo.

Authors:  Nathalie Lenne-Samuel; Jérôme Wagner; Hélène Etienne; Robert P P Fuchs
Journal:  EMBO Rep       Date:  2001-12-19       Impact factor: 8.807

4.  Mutations in the Bacillus subtilis beta clamp that separate its roles in DNA replication from mismatch repair.

Authors:  Nicole M Dupes; Brian W Walsh; Andrew D Klocko; Justin S Lenhart; Heather L Peterson; David A Gessert; Cassie E Pavlick; Lyle A Simmons
Journal:  J Bacteriol       Date:  2010-05-07       Impact factor: 3.490

Review 5.  DNA replication fidelity in Escherichia coli: a multi-DNA polymerase affair.

Authors:  Iwona J Fijalkowska; Roel M Schaaper; Piotr Jonczyk
Journal:  FEMS Microbiol Rev       Date:  2012-04-05       Impact factor: 16.408

6.  An expanded view of bacterial DNA replication.

Authors:  Marie-Françoise Noirot-Gros; Etienne Dervyn; Ling Juan Wu; Peggy Mervelet; Jeffery Errington; S Dusko Ehrlich; Philippe Noirot
Journal:  Proc Natl Acad Sci U S A       Date:  2002-06-11       Impact factor: 11.205

7.  A peptide switch regulates DNA polymerase processivity.

Authors:  Francisco J López de Saro; Roxana E Georgescu; Mike O'Donnell
Journal:  Proc Natl Acad Sci U S A       Date:  2003-11-20       Impact factor: 11.205

8.  Competitive processivity-clamp usage by DNA polymerases during DNA replication and repair.

Authors:  Francisco J López de Saro; Roxana E Georgescu; Myron F Goodman; Mike O'Donnell
Journal:  EMBO J       Date:  2003-12-01       Impact factor: 11.598

9.  Structural basis for recruitment of translesion DNA polymerase Pol IV/DinB to the beta-clamp.

Authors:  Karen A Bunting; S Mark Roe; Laurence H Pearl
Journal:  EMBO J       Date:  2003-11-03       Impact factor: 11.598

10.  MutS inhibits RecA-mediated strand exchange with platinated DNA substrates.

Authors:  Melissa A Calmann; M G Marinus
Journal:  Proc Natl Acad Sci U S A       Date:  2004-09-16       Impact factor: 11.205

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