Literature DB >> 11457182

Magnetic susceptibility tensor anisotropies for a lanthanide ion series in a fixed protein matrix.

I Bertini1, M B Janik, Y M Lee, C Luchinat, A Rosato.   

Abstract

The full series of lanthanide ions (except the radioactive promethium and the S-state gadolinium) has been incorporated into the C-terminal calcium binding site of the dicalcium protein calbindin D(9k). A fairly constant coordination environment is maintained throughout the series. At variance with several lanthanide complexes with small chelating ligands investigated in the past, the large protein moiety provides a large number of NMR signals whose hyperfine shifts can be exclusively ascribed to pseudocontact shifts (PCS). The chemical shifts of 1H and 15N backbone and side chain amide NH groups were accurately measured through HSQC experiments. 1097 PCS were estimated from these by subtracting the diamagnetic contributions measured on HSQC spectra of either the 4f(0) lanthanum(III) or the 4f(14) lutetium(III) derivatives and used to define a quality factor for the structure. The differences in diamagnetic chemical shifts between the two diamagnetic blanks were relatively small, although some were not negligible especially for the nuclei closest to the metal center. These differences were used as a tolerance for the PCS. The magnetic susceptibility tensor anisotropies for each paramagnetic lanthanide ion were obtained as the result of the solution structure determination performed by using the NOEs of the cerium(III) derivative and the PCS of all lanthanides simultaneously. This set of reliable magnetic data permits an experimental assessment of Bleaney's theory relative to the magnetic properties for an extended series of lanthanide complexes in solution. All of the obtained tensors show some rhombicity, as could be expected from the lack of symmetry of the protein environment. The directions of the largest magnetic susceptibility component for Ce, Pr, Nd, Sm, Tb, Dy, and Ho and of the smallest magnetic susceptibility component for Eu, Er, Tm, and Yb were found to be all within 15 degrees from their average (within 20 degrees for Sm), confirming the essential similarity of the coordination environment for all lanthanides. Bleaney's theory is in excellent qualitative agreement with the observed pattern of axial anisotropies. Its quantitative agreement is substantially better than that suggested by previous analyses performed on more limited sets of PCS data for small lanthanide complexes, the so-called crystal field parameter varying only within +/-30% from one lanthanide to another. These variations are even smaller (+/-15%) if a reasonable T(-3) correction is taken into consideration. A knowledge of magnetic susceptibility anisotropy properties of lanthanides is essential in determining the self-orienting properties of lanthanide complexes in solution when immersed in magnetic fields.

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Year:  2001        PMID: 11457182     DOI: 10.1021/ja0028626

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  48 in total

1.  Paramagnetism-based versus classical constraints: an analysis of the solution structure of Ca Ln calbindin D9k.

Authors:  I Bertini; A Donaire; B Jiménez; C Luchinat; G Parigi; M Piccioli; L Poggi
Journal:  J Biomol NMR       Date:  2001-10       Impact factor: 2.835

2.  Efficiency of paramagnetism-based constraints to determine the spatial arrangement of alpha-helical secondary structure elements.

Authors:  Ivano Bertini; Marco Longinetti; Claudio Luchinat; Giacomo Parigi; Luca Sgheri
Journal:  J Biomol NMR       Date:  2002-02       Impact factor: 2.835

3.  Structural basis for sequential displacement of Ca(2+) by Yb(3+) in a protozoan EF-hand calcium binding protein.

Authors:  Hanudatta S Atreya; Sulakshana Mukherjee; Kandala V R Chary; Yong-Min Lee; Claudio Luchinat
Journal:  Protein Sci       Date:  2003-03       Impact factor: 6.725

4.  Paramagnetism-based restraints for Xplor-NIH.

Authors:  Lucia Banci; Ivano Bertini; Gabriele Cavallaro; Andrea Giachetti; Claudio Luchinat; Giacomo Parigi
Journal:  J Biomol NMR       Date:  2004-03       Impact factor: 2.835

5.  Breaking symmetry in the structure determination of (large) symmetric protein dimers.

Authors:  Vadim Gaponenko; Amanda S Altieri; Jess Li; R Andrew Byrd
Journal:  J Biomol NMR       Date:  2002-10       Impact factor: 2.835

6.  Experimentally exploring the conformational space sampled by domain reorientation in calmodulin.

Authors:  Ivano Bertini; Cristina Del Bianco; Ioannis Gelis; Nikolaus Katsaros; Claudio Luchinat; Giacomo Parigi; Massimiliano Peana; Alessandro Provenzani; Maria Antonietta Zoroddu
Journal:  Proc Natl Acad Sci U S A       Date:  2004-04-20       Impact factor: 11.205

Review 7.  Alternatives to gadolinium-based metal chelates for magnetic resonance imaging.

Authors:  Subha Viswanathan; Zoltan Kovacs; Kayla N Green; S James Ratnakar; A Dean Sherry
Journal:  Chem Rev       Date:  2010-05-12       Impact factor: 60.622

8.  Engineering encodable lanthanide-binding tags into loop regions of proteins.

Authors:  Katja Barthelmes; Anne M Reynolds; Ezra Peisach; Hendrik R A Jonker; Nicholas J DeNunzio; Karen N Allen; Barbara Imperiali; Harald Schwalbe
Journal:  J Am Chem Soc       Date:  2011-02-02       Impact factor: 15.419

9.  Efficient chi-tensor determination and NH assignment of paramagnetic proteins.

Authors:  Christophe Schmitz; Michael John; Ah Young Park; Nicholas E Dixon; Gottfried Otting; Guido Pintacuda; Thomas Huber
Journal:  J Biomol NMR       Date:  2006-06-10       Impact factor: 2.835

10.  Long-range paramagnetic NMR data can provide a closer look on metal coordination in metalloproteins.

Authors:  Linda Cerofolini; Tommaso Staderini; Stefano Giuntini; Enrico Ravera; Marco Fragai; Giacomo Parigi; Roberta Pierattelli; Claudio Luchinat
Journal:  J Biol Inorg Chem       Date:  2017-12-07       Impact factor: 3.358

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