Literature DB >> 11438642

New model for the yeast RNA polymerase I transcription cycle.

P Aprikian1, B Moorefield, R H Reeder.   

Abstract

Using an immobilized template assay, we observed two steps in assembly of the yeast RNA polymerase I (Pol I) preinitiation complex: stable binding of upstream activating factor (UAF) followed by recruitment of Pol I-Rrn3p and core factor (CF). Pol I is required for stable association of CF with the promoter and can be recruited in the absence of Rrn3p. Upon transcription initiation, Pol I-Rrn3p and CF dissociate from the promoter while UAF remains behind. These findings support a novel model in which the Pol I basal machinery cycles on and off the promoter with each round of transcription. This model accounts for previous observations that rRNA synthesis may be controlled by regulating both promoter accessibility and polymerase activity.

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Year:  2001        PMID: 11438642      PMCID: PMC87188          DOI: 10.1128/MCB.21.15.4847-4855.2001

Source DB:  PubMed          Journal:  Mol Cell Biol        ISSN: 0270-7306            Impact factor:   4.272


  38 in total

1.  Identification of a mammalian RNA polymerase I holoenzyme containing components of the DNA repair/replication system.

Authors:  R D Hannan; A Cavanaugh; W M Hempel; T Moss; L Rothblum
Journal:  Nucleic Acids Res       Date:  1999-09-15       Impact factor: 16.971

2.  Recruitment of the SWI/SNF chromatin remodeling complex by transcriptional activators.

Authors:  N Yudkovsky; C Logie; S Hahn; C L Peterson
Journal:  Genes Dev       Date:  1999-09-15       Impact factor: 11.361

Review 3.  Subunits of yeast RNA polymerases: structure and function.

Authors:  A Ishihama; M Kimura; H Mitsuzawa
Journal:  Curr Opin Microbiol       Date:  1998-04       Impact factor: 7.934

4.  The recruitment of RNA polymerase I on rDNA is mediated by the interaction of the A43 subunit with Rrn3.

Authors:  G Peyroche; P Milkereit; N Bischler; H Tschochner; P Schultz; A Sentenac; C Carles; M Riva
Journal:  EMBO J       Date:  2000-10-16       Impact factor: 11.598

5.  The Isw2 chromatin remodeling complex represses early meiotic genes upon recruitment by Ume6p.

Authors:  J P Goldmark; T G Fazzio; P W Estep; G M Church; T Tsukiyama
Journal:  Cell       Date:  2000-10-27       Impact factor: 41.582

6.  Intermediates in formation and activity of the RNA polymerase II preinitiation complex: holoenzyme recruitment and a postrecruitment role for the TATA box and TFIIB.

Authors:  J A Ranish; N Yudkovsky; S Hahn
Journal:  Genes Dev       Date:  1999-01-01       Impact factor: 11.361

7.  RNA polymerase I transcription factor Rrn3 is functionally conserved between yeast and human.

Authors:  B Moorefield; E A Greene; R H Reeder
Journal:  Proc Natl Acad Sci U S A       Date:  2000-04-25       Impact factor: 11.205

8.  TATA binding protein can stimulate core-directed transcription by yeast RNA polymerase I.

Authors:  P Aprikian; B Moorefield; R H Reeder
Journal:  Mol Cell Biol       Date:  2000-07       Impact factor: 4.272

9.  Reconstitution of yeast RNA polymerase I transcription in vitro from purified components. TATA-binding protein is not required for basal transcription.

Authors:  J Keener; C A Josaitis; J A Dodd; M Nomura
Journal:  J Biol Chem       Date:  1998-12-11       Impact factor: 5.157

10.  A suppressor of two essential checkpoint genes identifies a novel protein that negatively affects dNTP pools.

Authors:  X Zhao; E G Muller; R Rothstein
Journal:  Mol Cell       Date:  1998-09       Impact factor: 17.970

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  35 in total

1.  Differential roles of phosphorylation in the formation of transcriptional active RNA polymerase I.

Authors:  S Fath; P Milkereit; G Peyroche; M Riva; C Carles; H Tschochner
Journal:  Proc Natl Acad Sci U S A       Date:  2001-11-20       Impact factor: 11.205

2.  RNA polymerase I remains intact without subunit exchange through multiple rounds of transcription in Saccharomyces cerevisiae.

Authors:  David A Schneider; Masayasu Nomura
Journal:  Proc Natl Acad Sci U S A       Date:  2004-10-11       Impact factor: 11.205

3.  CTD kinase I is involved in RNA polymerase I transcription.

Authors:  Céline Bouchoux; Guillaume Hautbergue; Sabrina Grenetier; Christophe Carles; Michel Riva; Valérie Goguel
Journal:  Nucleic Acids Res       Date:  2004-11-01       Impact factor: 16.971

4.  RNA polymerase I transcription factors in active yeast rRNA gene promoters enhance UV damage formation and inhibit repair.

Authors:  Andreas Meier; Fritz Thoma
Journal:  Mol Cell Biol       Date:  2005-03       Impact factor: 4.272

5.  Phosphorylation by casein kinase 2 facilitates rRNA gene transcription by promoting dissociation of TIF-IA from elongating RNA polymerase I.

Authors:  Holger Bierhoff; Miroslav Dundr; Annemieke A Michels; Ingrid Grummt
Journal:  Mol Cell Biol       Date:  2008-06-16       Impact factor: 4.272

6.  Alternative chromatin structures of the 35S rRNA genes in Saccharomyces cerevisiae provide a molecular basis for the selective recruitment of RNA polymerases I and II.

Authors:  Hannah Goetze; Manuel Wittner; Stephan Hamperl; Maria Hondele; Katharina Merz; Ulrike Stoeckl; Joachim Griesenbeck
Journal:  Mol Cell Biol       Date:  2010-02-12       Impact factor: 4.272

7.  The dynamic assembly of distinct RNA polymerase I complexes modulates rDNA transcription.

Authors:  Eva Torreira; Jaime Alegrio Louro; Irene Pazos; Noelia González-Polo; David Gil-Carton; Ana Garcia Duran; Sébastien Tosi; Oriol Gallego; Olga Calvo; Carlos Fernández-Tornero
Journal:  Elife       Date:  2017-03-06       Impact factor: 8.140

8.  RPD3 is required for the inactivation of yeast ribosomal DNA genes in stationary phase.

Authors:  Joseph J Sandmeier; Sarah French; Yvonne Osheim; Wang L Cheung; Christopher M Gallo; Ann L Beyer; Jeffrey S Smith
Journal:  EMBO J       Date:  2002-09-16       Impact factor: 11.598

9.  Tor pathway regulates Rrn3p-dependent recruitment of yeast RNA polymerase I to the promoter but does not participate in alteration of the number of active genes.

Authors:  Jonathan A Claypool; Sarah L French; Katsuki Johzuka; Kristilyn Eliason; Loan Vu; Jonathan A Dodd; Ann L Beyer; Masayasu Nomura
Journal:  Mol Biol Cell       Date:  2003-10-31       Impact factor: 4.138

10.  Characterization of the interactions of mammalian RNA polymerase I associated proteins PAF53 and PAF49.

Authors:  Yvonne Penrod; Katrina Rothblum; Lawrence I Rothblum
Journal:  Biochemistry       Date:  2012-08-08       Impact factor: 3.162

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