Literature DB >> 11411725

Zobellia galactanovorans gen. nov., sp. nov., a marine species of Flavobacteriaceae isolated from a red alga, and classification of [Cytophaga] uliginosa (ZoBell and Upham 1944) Reichenbach 1989 as Zobellia uliginosa gen. nov., comb. nov.

T Barbeyron, S L'Haridon, E Corre, B Kloareg, P Potin.   

Abstract

A mesophilic, aerobic, non-flagellated, gliding bacterium, forming yellow colonies and designated DsijT, was isolated from a red alga on the sea-shore of Roscoff, Brittany, France. DsijT was selected for its ability to actively degrade both agars and carrageenans. The Gram-negative cells occurred singly or in pairs as long rods. The temperature range for growth was 13-45 degrees C, with an optimum at 35 degrees C. The pH range for growth at 35 degrees C was from 6.0 to 8.5, with an optimum around pH 7.0. The NaCl concentrations required for growth at 35 degrees C and pH 7.0 ranged from 5 to 60 g l(-1), with an optimum around 25 g l(-1). The G+C content of the genomic DNA was 42-43 mol%. Phylogenetic analysis of 16S rRNA gene sequences indicated that strain DsijT is closely related to [Cytophaga] uliginosa DSM 2061T. Phenotypic features, however, allowed DsijT and [Cytophaga] uliginosa strains to be distinguished on the basis of ten traits (spreading behaviour, assimilation of eight compounds and amylase production). Their total protein profiles were also different and DNA-DNA hybridization experiments confirmed that DsijT constitutes a new species, distinct from [Cytophaga] uliginosa. Based on the phenotypic features and the phylogenetic relationships of the Flavobacteriaceae, a new genus designated Zobellia gen. nov. is proposed to include Zobellia galactanovorans gen. nov., sp. nov., while [Cytophaga] uliginosa becomes Zobellia uliginosa comb. nov. The type strain of Zobellia galactanovorans is DsijT (= DSM 12802T = CIP 106680T).

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Year:  2001        PMID: 11411725     DOI: 10.1099/00207713-51-3-985

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  36 in total

1.  Biochemical and structural characterization of the complex agarolytic enzyme system from the marine bacterium Zobellia galactanivorans.

Authors:  Jan-Hendrik Hehemann; Gaëlle Correc; François Thomas; Thomas Bernard; Tristan Barbeyron; Murielle Jam; William Helbert; Gurvan Michel; Mirjam Czjzek
Journal:  J Biol Chem       Date:  2012-07-09       Impact factor: 5.157

2.  The genome of the alga-associated marine flavobacterium Formosa agariphila KMM 3901T reveals a broad potential for degradation of algal polysaccharides.

Authors:  Alexander J Mann; Richard L Hahnke; Sixing Huang; Johannes Werner; Peng Xing; Tristan Barbeyron; Bruno Huettel; Kurt Stüber; Richard Reinhardt; Jens Harder; Frank Oliver Glöckner; Rudolf I Amann; Hanno Teeling
Journal:  Appl Environ Microbiol       Date:  2013-08-30       Impact factor: 4.792

3.  The β-glucanase ZgLamA from Zobellia galactanivorans evolved a bent active site adapted for efficient degradation of algal laminarin.

Authors:  Aurore Labourel; Murielle Jam; Alexandra Jeudy; Jan-Hendrik Hehemann; Mirjam Czjzek; Gurvan Michel
Journal:  J Biol Chem       Date:  2013-12-11       Impact factor: 5.157

4.  Draft genome sequence of the novel agar-digesting marine bacterium HQM9.

Authors:  Zongjun Du; Zhewen Zhang; Tingting Miao; Jiayan Wu; Guoqiang Lü; Jun Yu; Jingfa Xiao; Guanjun Chen
Journal:  J Bacteriol       Date:  2011-07-01       Impact factor: 3.490

5.  The Vanadium Iodoperoxidase from the marine flavobacteriaceae species Zobellia galactanivorans reveals novel molecular and evolutionary features of halide specificity in the vanadium haloperoxidase enzyme family.

Authors:  Jean-Baptiste Fournier; Etienne Rebuffet; Ludovic Delage; Romain Grijol; Laurence Meslet-Cladière; Justyna Rzonca; Philippe Potin; Gurvan Michel; Mirjam Czjzek; Catherine Leblanc
Journal:  Appl Environ Microbiol       Date:  2014-09-26       Impact factor: 4.792

6.  Ochrovirga pacifica gen. nov., sp. nov., a novel agar-lytic marine bacterium of the family Flavobacteriaceae isolated from a seaweed.

Authors:  Young-Kyung Kwon; Ji Hyung Kim; Jennifer Jooyoun Kim; Sung-Hyun Yang; Bo-Ram Ye; Soo-Jin Heo; Jung-Ho Hyun; Zhong-Ji Qian; Heung-Sik Park; Do-Hyung Kang; Chulhong Oh
Journal:  Curr Microbiol       Date:  2014-05-20       Impact factor: 2.188

7.  Influence of exudates of the kelp Laminaria digitata on biofilm formation of associated and exogenous bacterial epiphytes.

Authors:  Stéphanie Salaün; Stéphane La Barre; Marina Dos Santos-Goncalvez; Philippe Potin; Dominique Haras; Alexis Bazire
Journal:  Microb Ecol       Date:  2012-04-04       Impact factor: 4.552

8.  The agar-specific hydrolase ZgAgaC from the marine bacterium Zobellia galactanivorans defines a new GH16 protein subfamily.

Authors:  Anaïs Naretto; Mathieu Fanuel; David Ropartz; Hélène Rogniaux; Robert Larocque; Mirjam Czjzek; Charles Tellier; Gurvan Michel
Journal:  J Biol Chem       Date:  2019-03-07       Impact factor: 5.157

9.  Analysis of keystone enzyme in Agar hydrolysis provides insight into the degradation (of a polysaccharide from) red seaweeds.

Authors:  Jan-Hendrik Hehemann; Leo Smyth; Anuj Yadav; David J Vocadlo; Alisdair B Boraston
Journal:  J Biol Chem       Date:  2012-03-05       Impact factor: 5.157

10.  The endo-beta-agarases AgaA and AgaB from the marine bacterium Zobellia galactanivorans: two paralogue enzymes with different molecular organizations and catalytic behaviours.

Authors:  Murielle Jam; Didier Flament; Julie Allouch; Philippe Potin; Laurent Thion; Bernard Kloareg; Mirjam Czjzek; William Helbert; Gurvan Michel; Tristan Barbeyron
Journal:  Biochem J       Date:  2005-02-01       Impact factor: 3.857

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