Literature DB >> 11371432

Continuum solvent model studies of the interactions of an anticonvulsant drug with a lipid bilayer.

A Kessel1, B Musafia, N Ben-Tal.   

Abstract

Valproic acid (VPA) is a short, branched fatty acid with broad-spectrum anticonvulsant activity. It has been suggested that VPA acts directly on the plasma membrane. We calculated the free energy of interaction of VPA with a model lipid bilayer using simulated annealing and the continuum solvent model. Our calculations indicate that VPA is likely to partition into the bilayer both in its neutral and charged forms, as expected from such an amphipathic molecule. The calculations also show that VPA may migrate (flip-flop) across the membrane; according to our (theoretical) study, the most likely flip-flop path at neutral pH involves protonation of VPA pending its insertion into the lipid bilayer and deprotonation upon departure from the other side of the bilayer. Recently, the flip-flop of long fatty acids across lipid bilayers was studied using fluorescence and NMR spectroscopies. However, the measured value of the flip-flop rate appears to depend on the method used in these studies. Our calculated value of the flip-flop rate constant, 20/s, agrees with some of these studies. The limitations of the model and the implications of the study for VPA and other fatty acids are discussed.

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Year:  2001        PMID: 11371432      PMCID: PMC1301443          DOI: 10.1016/S0006-3495(01)76225-X

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  54 in total

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Journal:  Annu Rev Biophys Biomol Struct       Date:  1999

2.  Direct determination of the membrane affinities of individual amino acids.

Authors:  T E Thorgeirsson; C J Russell; D S King; Y K Shin
Journal:  Biochemistry       Date:  1996-02-13       Impact factor: 3.162

Review 3.  Experimentally determined hydrophobicity scale for proteins at membrane interfaces.

Authors:  W C Wimley; S H White
Journal:  Nat Struct Biol       Date:  1996-10

4.  Statistical thermodynamic analysis of peptide and protein insertion into lipid membranes.

Authors:  A Ben-Shaul; N Ben-Tal; B Honig
Journal:  Biophys J       Date:  1996-07       Impact factor: 4.033

Review 5.  Signal sequences: the same yet different.

Authors:  N Zheng; L M Gierasch
Journal:  Cell       Date:  1996-09-20       Impact factor: 41.582

6.  Free-energy determinants of alpha-helix insertion into lipid bilayers.

Authors:  N Ben-Tal; A Ben-Shaul; A Nicholls; B Honig
Journal:  Biophys J       Date:  1996-04       Impact factor: 4.033

7.  Fatty acid flip-flop in phospholipid bilayers is extremely fast.

Authors:  F Kamp; D Zakim; F Zhang; N Noy; J A Hamilton
Journal:  Biochemistry       Date:  1995-09-19       Impact factor: 3.162

8.  Binding of small basic peptides to membranes containing acidic lipids: theoretical models and experimental results.

Authors:  N Ben-Tal; B Honig; R M Peitzsch; G Denisov; S McLaughlin
Journal:  Biophys J       Date:  1996-08       Impact factor: 4.033

9.  Uptake of valproic acid into rat brain is mediated by a medium-chain fatty acid transporter.

Authors:  K D Adkison; D D Shen
Journal:  J Pharmacol Exp Ther       Date:  1996-03       Impact factor: 4.030

10.  Membrane binding of myristylated peptides corresponding to the NH2 terminus of Src.

Authors:  C A Buser; C T Sigal; M D Resh; S McLaughlin
Journal:  Biochemistry       Date:  1994-11-08       Impact factor: 3.162

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  10 in total

1.  Interactions of the M2delta segment of the acetylcholine receptor with lipid bilayers: a continuum-solvent model study.

Authors:  Amit Kessel; Turkan Haliloglu; Nir Ben-Tal
Journal:  Biophys J       Date:  2003-12       Impact factor: 4.033

2.  Identifying an uptake mechanism for the antiepileptic and bipolar disorder treatment valproic acid using the simple biomedical model Dictyostelium.

Authors:  Nicole Terbach; Rishita Shah; Rachel Kelemen; Peter S Klein; Dmitri Gordienko; Nigel A Brown; Christopher J Wilkinson; Robin S B Williams
Journal:  J Cell Sci       Date:  2011-06-07       Impact factor: 5.285

3.  Polarity of Hydrated Phosphatidylcholine Headgroups.

Authors:  Rajesh Subramaniam; Sandra Lynch; Yana Cen; Stefan Balaz
Journal:  Langmuir       Date:  2019-06-17       Impact factor: 3.882

4.  Free diffusion of steroid hormones across biomembranes: a simplex search with implicit solvent model calculations.

Authors:  Idit Oren; Sarel J Fleishman; Amit Kessel; Nir Ben-Tal
Journal:  Biophys J       Date:  2004-08       Impact factor: 4.033

5.  Structural determinants of drug partitioning in surrogates of phosphatidylcholine bilayer strata.

Authors:  Viera Lukacova; Senthil Natesan; Ming Peng; Roman Tandlich; Zhanbin Wang; Sandra Lynch; Rajesh Subramaniam; Stefan Balaz
Journal:  Mol Pharm       Date:  2013-09-11       Impact factor: 4.939

6.  Computational model for predicting chemical substituent effects on passive drug permeability across parallel artificial membranes.

Authors:  Chayan Acharya; Paul R Seo; James E Polli; Alexander D Mackerell
Journal:  Mol Pharm       Date:  2008-08-19       Impact factor: 4.939

7.  Structural determinants of drug partitioning in n-hexadecane/water system.

Authors:  Senthil Natesan; Zhanbin Wang; Viera Lukacova; Ming Peng; Rajesh Subramaniam; Sandra Lynch; Stefan Balaz
Journal:  J Chem Inf Model       Date:  2013-05-21       Impact factor: 4.956

8.  Permeation across hydrated DPPC lipid bilayers: simulation of the titrable amphiphilic drug valproic acid.

Authors:  Johan Ulander; A D J Haymet
Journal:  Biophys J       Date:  2003-12       Impact factor: 4.033

9.  A Permeability Study of O2 and the Trace Amine p-Tyramine through Model Phosphatidylcholine Bilayers.

Authors:  Bryan W Holland; Mark D Berry; C G Gray; Bruno Tomberli
Journal:  PLoS One       Date:  2015-06-18       Impact factor: 3.240

10.  Structure-based prediction of drug distribution across the headgroup and core strata of a phospholipid bilayer using surrogate phases.

Authors:  Senthil Natesan; Viera Lukacova; Ming Peng; Rajesh Subramaniam; Sandra Lynch; Zhanbin Wang; Roman Tandlich; Stefan Balaz
Journal:  Mol Pharm       Date:  2014-09-18       Impact factor: 4.939

  10 in total

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