Literature DB >> 11348792

Development of the X-linked tetrameric microsatellite marker HumDXS6789 for forensic purposes.

S Hering1, E Kuhlisch, R Szibor.   

Abstract

This paper presents sequence and population genetic data of the X-linked DXS6789 short tandem repeat (STR). The tetranucleotide repeat polymorphism DXS6789, also known as CHLC.GATA31F01, is located at the Xq22.3 region. This locus is unlinked with DXS6807 and slightly linked with ARA, DXS9898 and HPRTB. In kinship testing, DXS6789 is suitable for concomitant use with DXS6807. Population genetic data were obtained by analysing 250 unrelated males and 315 females from East Germany. In this population, the STR exhibited 12 clearly distinguishable alleles ranging from 154 to 198bps in length. DXS6789 is characterised by the following data: polymorphic information content (PIC)=0.70; observed heterozygosity (Het)=0.78; mean exclusion chance (MEC)=0.70. A deviation from the Hardy-Weinberg equilibrium could not be detected. The investigations we performed in 243 mother-child and 161 father-child meioses did not reveal any mutations.

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Year:  2001        PMID: 11348792     DOI: 10.1016/s0379-0738(00)00396-0

Source DB:  PubMed          Journal:  Forensic Sci Int        ISSN: 0379-0738            Impact factor:   2.395


  15 in total

1.  Validation of the X-chromosomal STR DXS6809.

Authors:  J Edelmann; D Deichsel; I Plate; M Käser; R Szibor
Journal:  Int J Legal Med       Date:  2003-05-14       Impact factor: 2.686

2.  Comments on the paper entitled "polymorphism of nine X chromosomal STR loci in Koreans" by Jin Young Son et al. (2002) Int J Legal Med 116:317-321.

Authors:  R Szibor; J Edelmann; S Hering
Journal:  Int J Legal Med       Date:  2003-06-19       Impact factor: 2.686

Review 3.  Use of X-linked markers for forensic purposes.

Authors:  R Szibor; M Krawczak; S Hering; J Edelmann; E Kuhlisch; D Krause
Journal:  Int J Legal Med       Date:  2003-02-15       Impact factor: 2.686

4.  Development of two multiplex PCR systems for the analysis of 14 X-chromosomal STR loci in a southern Brazilian population sample.

Authors:  Larissa Siqueira Penna; Fernanda Gamio Silva; Patricia Hartstein Salim; Gisele Ewald; Mariana Jobim; José Antônio de Azevedo Magalhães; Luiz Fernando Jobim
Journal:  Int J Legal Med       Date:  2011-10-15       Impact factor: 2.686

5.  Study of six X-linked tetranucleotide microsatellites: population data from five Spanish regions.

Authors:  Maria T Zarrabeitia; Ana Alonso; Javier Martin; Miguel A Gonzalez-Gay; Juan C Martin-Escudero; Marian Martinez de Pancorbo; Pilar Sanz; Francisco Ruiz-Cabello; Jose A Riancho
Journal:  Int J Legal Med       Date:  2005-11-19       Impact factor: 2.686

6.  Haplotyping of STR cluster DXS6801-DXS6809-DXS6789 on Xq21 provides a powerful tool for kinship testing.

Authors:  Reinhard Szibor; Sandra Hering; Eberhard Kuhlisch; Ines Plate; Susanne Demberger; Michael Krawczak; Jeanett Edelmann
Journal:  Int J Legal Med       Date:  2005-08-11       Impact factor: 2.686

7.  MiniX-STR multiplex system population study in Japan and application to degraded DNA analysis.

Authors:  H Asamura; H Sakai; K Kobayashi; M Ota; H Fukushima
Journal:  Int J Legal Med       Date:  2006-02-11       Impact factor: 2.686

8.  A GEP-ISFG collaborative study on the optimization of an X-STR decaplex: data on 15 Iberian and Latin American populations.

Authors:  Leonor Gusmão; Paula Sánchez-Diz; Cíntia Alves; Iva Gomes; María Teresa Zarrabeitia; Mariel Abovich; Ivannia Atmetlla; Cecilia Bobillo; Luisa Bravo; Juan Builes; Laura Cainé; Raquel Calvo; Elizeu Carvalho; Mónica Carvalho; Regina Cicarelli; Laura Catelli; Daniel Corach; Marta Espinoza; Oscar García; Marcelo Malaghini; Joyce Martins; Fátima Pinheiro; Maria João Porto; Eduardo Raimondi; Jose Antonio Riancho; Amelia Rodríguez; Anayanci Rodríguez; Belén Rodríguez Cardozo; Vicente Schneider; Sandra Silva; Celso Tavares; Ulises Toscanini; Carlos Vullo; Martin Whittle; Iñaki Yurrebaso; Angel Carracedo; António Amorim
Journal:  Int J Legal Med       Date:  2008-12-12       Impact factor: 2.686

9.  X chromosomal recombination--a family study analysing 39 STR markers in German three-generation pedigrees.

Authors:  Sandra Hering; Jeanett Edelmann; Christa Augustin; Eberhard Kuhlisch; Reinhard Szibor
Journal:  Int J Legal Med       Date:  2009-11-20       Impact factor: 2.686

10.  Extensive survey of 12 X-STRs reveals genetic heterogeneity among Brazilian populations.

Authors:  Elzemar Martins Ribeiro-Rodrigues; Teresinha de Jesus Brabo Ferreira Palha; Eloisa Auler Bittencourt; Andrea Ribeiro-Dos-Santos; Sidney Santos
Journal:  Int J Legal Med       Date:  2011-03-15       Impact factor: 2.686

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