Literature DB >> 11337407

PROBING PLANT METABOLISM WITH NMR.

R George Ratcliffe1, Yair Shachar-Hill.   

Abstract

Analytical methods for probing plant metabolism are taking on new significance in the era of functional genomics and metabolic engineering. Among the available methods, nuclear magnetic resonance (NMR) spectroscopy is a technique that can provide insights into the integration and regulation of plant metabolism through a combination of in vivo and in vitro measurements. Thus NMR can be used to identify, quantify, and localize metabolites, to define the intracellular environment, and to explore pathways and their operation. We review these applications and their significance from a metabolic perspective. Topics of current interest include applications of NMR to metabolic flux analysis, metabolite profiling, and metabolite imaging. These and other areas are discussed in relation to NMR investigations of intermediary carbon and nitrogen metabolism. We conclude that metabolic NMR has a continuing role to play in the development of a quantitative understanding of plant metabolism and in the characterization of metabolic phenotypes.

Entities:  

Year:  2001        PMID: 11337407     DOI: 10.1146/annurev.arplant.52.1.499

Source DB:  PubMed          Journal:  Annu Rev Plant Physiol Plant Mol Biol        ISSN: 1040-2519


  25 in total

Review 1.  Biomarkers for neuroAIDS: the widening scope of metabolomics.

Authors:  Gurudutt Pendyala; Elizabeth J Want; William Webb; Gary Siuzdak; Howard S Fox
Journal:  J Neuroimmune Pharmacol       Date:  2006-10-10       Impact factor: 4.147

2.  Phosphate pool dynamics in the arbuscular mycorrhizal fungus Glomus intraradices studied by in vivo31 P NMR spectroscopy.

Authors:  Nanna Viereck; Poul Erik Hansen; Iver Jakobsen
Journal:  New Phytol       Date:  2004-06       Impact factor: 10.151

3.  The metabolic role of the legume endosperm: a noninvasive imaging study.

Authors:  Gerd Melkus; Hardy Rolletschek; Ruslana Radchuk; Johannes Fuchs; Twan Rutten; Ulrich Wobus; Thomas Altmann; Peter Jakob; Ljudmilla Borisjuk
Journal:  Plant Physiol       Date:  2009-09-11       Impact factor: 8.340

4.  Nuclear magnetic resonance spectroscopy-based metabolite profiling of transgenic tomato fruit engineered to accumulate spermidine and spermine reveals enhanced anabolic and nitrogen-carbon interactions.

Authors:  Autar K Mattoo; Anatoli P Sobolev; Anil Neelam; Ravinder K Goyal; Avtar K Handa; Anna L Segre
Journal:  Plant Physiol       Date:  2006-10-13       Impact factor: 8.340

Review 5.  Glutamate synthase: structural, mechanistic and regulatory properties, and role in the amino acid metabolism.

Authors:  Akira Suzuki; David B Knaff
Journal:  Photosynth Res       Date:  2005       Impact factor: 3.573

Review 6.  NMR analysis of plant nitrogen metabolism.

Authors:  F Mesnard; R G Ratcliffe
Journal:  Photosynth Res       Date:  2005       Impact factor: 3.573

7.  Primary metabolism in N2-fixing Alnus incana-Frankia symbiotic root nodules studied with 15N and 31P nuclear magnetic resonance spectroscopy.

Authors:  Peter Lundberg; Per-Olof Lundquist
Journal:  Planta       Date:  2004-06-04       Impact factor: 4.116

8.  Quantification of compartmented metabolic fluxes in developing soybean embryos by employing biosynthetically directed fractional (13)C labeling, two-dimensional [(13)C, (1)H] nuclear magnetic resonance, and comprehensive isotopomer balancing.

Authors:  Ganesh Sriram; D Bruce Fulton; Vidya V Iyer; Joan Marie Peterson; Ruilian Zhou; Mark E Westgate; Martin H Spalding; Jacqueline V Shanks
Journal:  Plant Physiol       Date:  2004-10-01       Impact factor: 8.340

9.  Nonuniform distribution of glucosinolates in Arabidopsis thaliana leaves has important consequences for plant defense.

Authors:  Rohit Shroff; Fredd Vergara; Alexander Muck; Ales Svatos; Jonathan Gershenzon
Journal:  Proc Natl Acad Sci U S A       Date:  2008-04-11       Impact factor: 11.205

10.  Resolving the role of plant glutamate dehydrogenase. I. In vivo real time nuclear magnetic resonance spectroscopy experiments.

Authors:  Soraya Labboun; Thérèse Tercé-Laforgue; Albrecht Roscher; Magali Bedu; Francesco M Restivo; Christos N Velanis; Damianos S Skopelitis; Panagiotis N Moschou; Panagiotis N Moshou; Kalliopi A Roubelakis-Angelakis; Akira Suzuki; Bertrand Hirel
Journal:  Plant Cell Physiol       Date:  2009-08-18       Impact factor: 4.927

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