Literature DB >> 11334666

Engineering the pH-optimum of a triglyceride lipase: from predictions based on electrostatic computations to experimental results.

M T Neves-Petersen1, E I Petersen, P Fojan, M Noronha, R G Madsen, S B Petersen.   

Abstract

The optimisation of enzymes for particular purposes or conditions remains an important target in virtually all protein engineering endeavours. Here, we present a successful strategy for altering the pH-optimum of the triglyceride lipase cutinase from Fusarium solani pisi. The computed electrostatic pH-dependent potentials in the active site environment are correlated with the experimentally observed enzymatic activities. At pH-optimum a distinct negative potential is present in all the lipases and esterases that we studied so far. This has prompted us to propose the "The Electrostatic Catapult Model" as a model for product release after cleavage of the ester bond. The origin of the negative potential is associated with the titration status of specific residues in the vicinity of the active site cleft. In the case of cutinase, the role of Glu44 was systematically investigated by mutations into Ala and Lys. Also, the neighbouring Thr45 was mutated into Proline, with the aim of shifting the spatial location of Glu44. All the charge mutants displayed altered titration behaviour of active site electrostatic potentials. Typically, the substitution of the residue Glu44 pushes the onset of the active site negative potential towards more alkaline conditions. We, therefore, predicted more alkaline pH optima, and this was indeed the experimentally observed. Finally, it was found that the pH-dependent computed Coulombic energy displayed a strong correlation with the observed melting temperatures of native cutinase.

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Year:  2001        PMID: 11334666     DOI: 10.1016/s0168-1656(01)00240-1

Source DB:  PubMed          Journal:  J Biotechnol        ISSN: 0168-1656            Impact factor:   3.307


  9 in total

1.  In silico investigation of pH-dependence of prolactin and human growth hormone binding to human prolactin receptor.

Authors:  Lin Wang; Shawn Witham; Zhe Zhang; Lin Li; Michael E Hodsdon; Emil Alexov
Journal:  Commun Comput Phys       Date:  2013-01       Impact factor: 3.246

2.  Insight into substituent effects in Cal-B catalyzed transesterification by combining experimental and theoretical approaches.

Authors:  Zhong Ni; Xianfu Lin
Journal:  J Mol Model       Date:  2012-08-25       Impact factor: 1.810

3.  Influence of surface charge, binding site residues and glycosylation on Thielavia terrestris cutinase biochemical characteristics.

Authors:  Abhijit N Shirke; Danielle Basore; Samantha Holton; An Su; Evan Baugh; Glenn L Butterfoss; George Makhatadze; Christopher Bystroff; Richard A Gross
Journal:  Appl Microbiol Biotechnol       Date:  2016-01-13       Impact factor: 4.813

4.  High probability of disrupting a disulphide bridge mediated by an endogenous excited tryptophan residue.

Authors:  Maria Teresa Neves-Petersen; Zygmunt Gryczynski; Joseph Lakowicz; Peter Fojan; Shona Pedersen; Evamaria Petersen; Steffen Bjørn Petersen
Journal:  Protein Sci       Date:  2002-03       Impact factor: 6.725

Review 5.  On the role of electrostatics in protein-protein interactions.

Authors:  Zhe Zhang; Shawn Witham; Emil Alexov
Journal:  Phys Biol       Date:  2011-05-13       Impact factor: 2.583

6.  Flash photolysis of cutinase: identification and decay kinetics of transient intermediates formed upon UV excitation of aromatic residues.

Authors:  Maria Teresa Neves-Petersen; Søren Klitgaard; Torbjorn Pascher; Esben Skovsen; Tomas Polivka; Arkady Yartsev; Villly Sundström; Steffen B Petersen
Journal:  Biophys J       Date:  2009-07-08       Impact factor: 4.033

7.  Enzyme replacement therapy for pancreatic insufficiency: present and future.

Authors:  Aaron Fieker; Jessica Philpott; Martine Armand
Journal:  Clin Exp Gastroenterol       Date:  2011-05-04

Review 8.  From structure to catalysis: recent developments in the biotechnological applications of lipases.

Authors:  Cristiane D Anobom; Anderson S Pinheiro; Rafael A De-Andrade; Erika C G Aguieiras; Guilherme C Andrade; Marcelo V Moura; Rodrigo V Almeida; Denise M Freire
Journal:  Biomed Res Int       Date:  2014-03-24       Impact factor: 3.411

9.  Revisiting Jatropha curcas Monomeric Esterase: A Dienelactone Hydrolase Compatible with the Electrostatic Catapult Model.

Authors:  Marcos Gustavo Araujo Schwarz; Deborah Antunes; Gabriela Coelho Brêda; Richard Hemmi Valente; Denise Maria Guimarães Freire
Journal:  Biomolecules       Date:  2021-10-09
  9 in total

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