Literature DB >> 11326819

Spacer oligonucleotide typing of bacteria of the Mycobacterium tuberculosis complex: recommendations for standardised nomenclature.

J W Dale1, D Brittain, A A Cataldi, D Cousins, J T Crawford, J Driscoll, H Heersma, T Lillebaek, T Quitugua, N Rastogi, R A Skuce, C Sola, D Van Soolingen, V Vincent.   

Abstract

Spacer oligonucleotide typing (spoligotyping) is widely used for differentiation of bacteria of the Mycobacterium tuberculosis complex. However, the absence of any standardised method for concise description of spoligotypes makes it difficult to compare the results from different laboratories. This paper describes unambiguous, interconvertible systems for the designation of spoligotype patterns, the adoption of which will be beneficial to mycobacterial research.

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Year:  2001        PMID: 11326819

Source DB:  PubMed          Journal:  Int J Tuberc Lung Dis        ISSN: 1027-3719            Impact factor:   2.373


  83 in total

1.  Variable-number tandem repeat typing of Mycobacterium tuberculosis isolates with low copy numbers of IS6110 by using mycobacterial interspersed repetitive units.

Authors:  Lauren Steinlein Cowan; Laura Mosher; Lois Diem; Jeffrey P Massey; Jack T Crawford
Journal:  J Clin Microbiol       Date:  2002-05       Impact factor: 5.948

2.  Continued low rates of transmission of Mycobacterium tuberculosis in Norway.

Authors:  Ulf R Dahle; Per Sandven; Einar Heldal; Dominique A Caugant
Journal:  J Clin Microbiol       Date:  2003-07       Impact factor: 5.948

3.  Genetic diversity and drug susceptibility of Mycobacterium tuberculosis isolates from Zunyi, one of the highest-incidence-rate areas in China.

Authors:  Ling Chen; Nana Li; Zhiguang Liu; Mei Liu; Bing Lv; Jianhua Wang; Jianyong Zhang; Kanglin Wan; Hong Zhang
Journal:  J Clin Microbiol       Date:  2012-01-11       Impact factor: 5.948

4.  Characterization of ancestral Mycobacterium tuberculosis by multiple genetic markers and proposal of genotyping strategy.

Authors:  Yong-Jiang Sun; Ann S G Lee; Sze Ta Ng; Sindhu Ravindran; Kristin Kremer; Richard Bellamy; Sin-Yew Wong; Dick van Soolingen; Philip Supply; Nicholas I Paton
Journal:  J Clin Microbiol       Date:  2004-11       Impact factor: 5.948

5.  Evaluation of the epidemiologic utility of secondary typing methods for differentiation of Mycobacterium tuberculosis isolates.

Authors:  Awewura Kwara; Ronald Schiro; Lauren S Cowan; Newton E Hyslop; Mark F Wiser; Stephanie Roahen Harrison; Patricia Kissinger; Lois Diem; Jack T Crawford
Journal:  J Clin Microbiol       Date:  2003-06       Impact factor: 5.948

6.  Rapid spoligotyping of Mycobacterium tuberculosis complex bacteria by use of a microarray system with automatic data processing and assignment.

Authors:  Anke Ruettger; Johanna Nieter; Artem Skrypnyk; Ines Engelmann; Albrecht Ziegler; Irmgard Moser; Stefan Monecke; Ralf Ehricht; Konrad Sachse
Journal:  J Clin Microbiol       Date:  2012-05-02       Impact factor: 5.948

7.  Analysis of Mycobacterium tuberculosis genotypes in Madrid and identification of two new families specific to Spain-related settings.

Authors:  Darío García de Viedma; Emilio Bouza; Nalin Rastogi; Christophe Sola
Journal:  J Clin Microbiol       Date:  2005-04       Impact factor: 5.948

8.  Characterization of Mycobacterium caprae isolates from Europe by mycobacterial interspersed repetitive unit genotyping.

Authors:  Wolfgang M Prodinger; Anita Brandstätter; Ludmila Naumann; Maria Pacciarini; Tanja Kubica; Maria Laura Boschiroli; Alicia Aranaz; György Nagy; Zeljko Cvetnic; Matjaz Ocepek; Artem Skrypnyk; Wilfried Erler; Stefan Niemann; Ivo Pavlik; Irmgard Moser
Journal:  J Clin Microbiol       Date:  2005-10       Impact factor: 5.948

9.  Snapshot of moving and expanding clones of Mycobacterium tuberculosis and their global distribution assessed by spoligotyping in an international study.

Authors:  Ingrid Filliol; Jeffrey R Driscoll; Dick van Soolingen; Barry N Kreiswirth; Kristin Kremer; Georges Valétudie; Duc Anh Dang; Rachael Barlow; Dilip Banerjee; Pablo J Bifani; Karine Brudey; Angel Cataldi; Robert C Cooksey; Debby V Cousins; Jeremy W Dale; Odir A Dellagostin; Francis Drobniewski; Guido Engelmann; Séverine Ferdinand; Deborah Gascoyne-Binzi; Max Gordon; M Cristina Gutierrez; Walter H Haas; Herre Heersma; Eric Kassa-Kelembho; Minh Ly Ho; Athanasios Makristathis; Caterina Mammina; Gerald Martin; Peter Moström; Igor Mokrousov; Valérie Narbonne; Olga Narvskaya; Antonino Nastasi; Sara Ngo Niobe-Eyangoh; Jean W Pape; Voahangy Rasolofo-Razanamparany; Malin Ridell; M Lucia Rossetti; Fritz Stauffer; Philip N Suffys; Howard Takiff; Jeanne Texier-Maugein; Véronique Vincent; Jacobus H de Waard; Christophe Sola; Nalin Rastogi
Journal:  J Clin Microbiol       Date:  2003-05       Impact factor: 5.948

10.  High-throughput method for detecting genomic-deletion polymorphisms.

Authors:  Yves-Olivier Luc Goguet de la Salmonière; C C Kim; A G Tsolaki; A S Pym; M S Siegrist; Peter M Small
Journal:  J Clin Microbiol       Date:  2004-07       Impact factor: 5.948

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