Literature DB >> 12791904

Evaluation of the epidemiologic utility of secondary typing methods for differentiation of Mycobacterium tuberculosis isolates.

Awewura Kwara1, Ronald Schiro, Lauren S Cowan, Newton E Hyslop, Mark F Wiser, Stephanie Roahen Harrison, Patricia Kissinger, Lois Diem, Jack T Crawford.   

Abstract

Spoligotyping and mycobacterial interspersed repetitive unit-variable-number tandem repeat analysis (MIRU-VNTR) were evaluated for the ability to differentiate 64 Mycobacterium tuberculosis isolates from 10 IS6110-defined clusters. MIRU-VNTR performed slightly better than spoligotyping in reducing the number of clustered isolates and the sizes of the clusters. All epidemiologically related isolates remained clustered by MIRU-VNTR but not by spoligotyping.

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Year:  2003        PMID： 12791904      PMCID： PMC156564          DOI： 10.1128/JCM.41.6.2683-2685.2003

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN： 0095-1137            Impact factor:   5.948


  13 in total

1.  Spacer oligonucleotide typing of bacteria of the Mycobacterium tuberculosis complex: recommendations for standardised nomenclature.

Authors:  J W Dale; D Brittain; A A Cataldi; D Cousins; J T Crawford; J Driscoll; H Heersma; T Lillebaek; T Quitugua; N Rastogi; R A Skuce; C Sola; D Van Soolingen; V Vincent
Journal:  Int J Tuberc Lung Dis       Date:  2001-03       Impact factor: 2.373

2.  Variable-number tandem repeat typing of Mycobacterium tuberculosis isolates with low copy numbers of IS6110 by using mycobacterial interspersed repetitive units.

Authors:  Lauren Steinlein Cowan; Laura Mosher; Lois Diem; Jeffrey P Massey; Jack T Crawford
Journal:  J Clin Microbiol       Date:  2002-05       Impact factor: 5.948

3.  Rapid detection and simultaneous strain differentiation of Mycobacterium tuberculosis complex bacteria by spoligotyping.

Authors:  H O Molhuizen; A E Bunschoten; L M Schouls; J D van Embden
Journal:  Methods Mol Biol       Date:  1998

4.  Epidemiologic usefulness of spoligotyping for secondary typing of Mycobacterium tuberculosis isolates with low copy numbers of IS6110.

Authors:  W A Cronin; J E Golub; L S Magder; N G Baruch; M J Lathan; L N Mukasa; N Hooper; J H Razeq; D Mulcahy; W H Benjamin; W R Bishai
Journal:  J Clin Microbiol       Date:  2001-10       Impact factor: 5.948

5.  Variable human minisatellite-like regions in the Mycobacterium tuberculosis genome.

Authors:  P Supply; E Mazars; S Lesjean; V Vincent; B Gicquel; C Locht
Journal:  Mol Microbiol       Date:  2000-05       Impact factor: 3.501

6.  High-resolution minisatellite-based typing as a portable approach to global analysis of Mycobacterium tuberculosis molecular epidemiology.

Authors:  E Mazars; S Lesjean; A L Banuls; M Gilbert; V Vincent; B Gicquel; M Tibayrenc; C Locht; P Supply
Journal:  Proc Natl Acad Sci U S A       Date:  2001-02-13       Impact factor: 11.205

7.  Comparison of various repetitive DNA elements as genetic markers for strain differentiation and epidemiology of Mycobacterium tuberculosis.

Authors:  D van Soolingen; P E de Haas; P W Hermans; P M Groenen; J D van Embden
Journal:  J Clin Microbiol       Date:  1993-08       Impact factor: 5.948

8.  Transmission of tuberculosis in New York City. An analysis by DNA fingerprinting and conventional epidemiologic methods.

Authors:  D Alland; G E Kalkut; A R Moss; R A McAdam; J A Hahn; W Bosworth; E Drucker; B R Bloom
Journal:  N Engl J Med       Date:  1994-06-16       Impact factor: 91.245

9.  An outbreak of multidrug-resistant tuberculosis among hospitalized patients with the acquired immunodeficiency syndrome.

Authors:  B R Edlin; J I Tokars; M H Grieco; J T Crawford; J Williams; E M Sordillo; K R Ong; J O Kilburn; S W Dooley; K G Castro
Journal:  N Engl J Med       Date:  1992-06-04       Impact factor: 91.245

10.  The epidemiology of tuberculosis in San Francisco. A population-based study using conventional and molecular methods.

Authors:  P M Small; P C Hopewell; S P Singh; A Paz; J Parsonnet; D C Ruston; G F Schecter; C L Daley; G K Schoolnik
Journal:  N Engl J Med       Date:  1994-06-16       Impact factor: 91.245
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  32 in total

1.  Analysis of the allelic diversity of the mycobacterial interspersed repetitive units in Mycobacterium tuberculosis strains of the Beijing family: practical implications and evolutionary considerations.

Authors:  Igor Mokrousov; Olga Narvskaya; Elena Limeschenko; Anna Vyazovaya; Tatiana Otten; Boris Vyshnevskiy
Journal:  J Clin Microbiol       Date:  2004-06       Impact factor: 5.948

2.  First worldwide proficiency study on variable-number tandem-repeat typing of Mycobacterium tuberculosis complex strains.

Authors:  Jessica L de Beer; Kristin Kremer; Csaba Ködmön; Philip Supply; Dick van Soolingen
Journal:  J Clin Microbiol       Date:  2011-12-14       Impact factor: 5.948

3.  Evaluation of the epidemiological relevance of variable-number tandem-repeat genotyping of Mycobacterium bovis and comparison of the method with IS6110 restriction fragment length polymorphism analysis and spoligotyping.

Authors:  Caroline Allix; Karl Walravens; Claude Saegerman; Jacques Godfroid; Philip Supply; Maryse Fauville-Dufaux
Journal:  J Clin Microbiol       Date:  2006-06       Impact factor: 5.948

4.  Characterization of ancestral Mycobacterium tuberculosis by multiple genetic markers and proposal of genotyping strategy.

Authors:  Yong-Jiang Sun; Ann S G Lee; Sze Ta Ng; Sindhu Ravindran; Kristin Kremer; Richard Bellamy; Sin-Yew Wong; Dick van Soolingen; Philip Supply; Nicholas I Paton
Journal:  J Clin Microbiol       Date:  2004-11       Impact factor: 5.948

5.  Sensitivities and specificities of spoligotyping and mycobacterial interspersed repetitive unit-variable-number tandem repeat typing methods for studying molecular epidemiology of tuberculosis.

Authors:  Allison N Scott; Dick Menzies; Terry-Nan Tannenbaum; Louise Thibert; Robert Kozak; Lawrence Joseph; Kevin Schwartzman; Marcel A Behr
Journal:  J Clin Microbiol       Date:  2005-01       Impact factor: 5.948

6.  Molecular typing of Mycobacterium tuberculosis by mycobacterial interspersed repetitive unit-variable-number tandem repeat analysis, a more accurate method for identifying epidemiological links between patients with tuberculosis.

Authors:  Henk van Deutekom; Philip Supply; Petra E W de Haas; Eve Willery; Susan P Hoijng; Camille Locht; Roel A Coutinho; Dick van Soolingen
Journal:  J Clin Microbiol       Date:  2005-09       Impact factor: 5.948

7.  Progression toward an improved DNA amplification-based typing technique in the study of Mycobacterium tuberculosis epidemiology.

Authors:  Krishna K Gopaul; Timothy J Brown; Andrea L Gibson; Malcolm D Yates; Francis A Drobniewski
Journal:  J Clin Microbiol       Date:  2006-07       Impact factor: 5.948

8.  First molecular epidemiology study of Mycobacterium tuberculosis in Burkina Faso.

Authors:  S Godreuil; G Torrea; D Terru; F Chevenet; S Diagbouga; P Supply; P Van de Perre; C Carriere; A L Bañuls
Journal:  J Clin Microbiol       Date:  2007-01-24       Impact factor: 5.948

9.  Characterization of extensively drug-resistant Mycobacterium tuberculosis clinical isolates in China.

Authors:  Zhaogang Sun; Yanjie Chao; Xuxia Zhang; Jianyuan Zhang; Yan Li; Yunqing Qiu; Yi Liu; Lihui Nie; Aizhen Guo; Chuanyou Li
Journal:  J Clin Microbiol       Date:  2008-10-22       Impact factor: 5.948

10.  Characterization of Mycobacterium caprae isolates from Europe by mycobacterial interspersed repetitive unit genotyping.

Authors:  Wolfgang M Prodinger; Anita Brandstätter; Ludmila Naumann; Maria Pacciarini; Tanja Kubica; Maria Laura Boschiroli; Alicia Aranaz; György Nagy; Zeljko Cvetnic; Matjaz Ocepek; Artem Skrypnyk; Wilfried Erler; Stefan Niemann; Ivo Pavlik; Irmgard Moser
Journal:  J Clin Microbiol       Date:  2005-10       Impact factor: 5.948
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