Literature DB >> 11304675

Electron spin resonance of TOAC labeled peptides: folding transitions and high frequency spectroscopy.

J C McNulty1, J L Silapie, M Carnevali, C T Farrar, R G Griffin, F Formaggio, M Crisma, C Toniolo, G L Millhauser.   

Abstract

The unnatural, conformationally constrained nitroxide amino acid TOAC (2,2,6,6-tetramethylpiperidine-1-oxyl-4-amino-4-carboxylic acid) stabilizes helical structure and provides a means for studying rigidly spin labeled peptides by electron spin resonance (ESR). Two new directions in TOAC research are described. The first investigates intermediates formed during alpha-helix unfolding. Double TOAC labeled alpha-helical peptides were unfolded at low temperature in aqueous solution with increasing concentrations of guanidine hydrochloride. Comparison of ESR spectra from two doubly labeled peptides suggests that 3(10)-helix emerges as an intermediate. The second research direction involves the use of high frequency ESR (140 GHz) at low temperature to assess dipolar couplings and, hence, distances between TOAC pairs in a series of 3(10)-helical peptides. Preliminary simulations suggest that high frequency ESR is able to extract correct distances between 6 and 11 A. In addition, the spectra appear to be very sensitive to the relative orientation of the TOAC labels. Copyright 2001 John Wiley & Sons, Inc. Biopolymers (Pept Sci) 55: 479-485, 2000

Entities:  

Mesh:

Substances:

Year:  2000        PMID: 11304675     DOI: 10.1002/1097-0282(2000)55:6<479::AID-BIP1023>3.0.CO;2-F

Source DB:  PubMed          Journal:  Biopolymers        ISSN: 0006-3525            Impact factor:   2.505


  8 in total

Review 1.  Foldamers as versatile frameworks for the design and evolution of function.

Authors:  Catherine M Goodman; Sungwook Choi; Scott Shandler; William F DeGrado
Journal:  Nat Chem Biol       Date:  2007-05       Impact factor: 15.040

2.  Structure and dynamics of a conformationally constrained nitroxide side chain and applications in EPR spectroscopy.

Authors:  Mark R Fleissner; Michael D Bridges; Evan K Brooks; Duilio Cascio; Tamás Kálai; Kálmán Hideg; Wayne L Hubbell
Journal:  Proc Natl Acad Sci U S A       Date:  2011-09-12       Impact factor: 11.205

Review 3.  Constructing a structural model of troponin using site-directed spin labeling: EPR and PRE-NMR.

Authors:  Ehsan Kachooei; Nicole M Cordina; Louise J Brown
Journal:  Biophys Rev       Date:  2019-07-18

4.  Trajectory-Based Simulation of EPR Spectra: Models of Rotational Motion for Spin Labels on Proteins.

Authors:  Peter D Martin; Bengt Svensson; David D Thomas; Stefan Stoll
Journal:  J Phys Chem B       Date:  2019-11-21       Impact factor: 2.991

5.  A spirocyclohexyl nitroxide amino acid spin label for pulsed EPR spectroscopy distance measurements.

Authors:  Andrzej Rajca; Velavan Kathirvelu; Sandip K Roy; Maren Pink; Suchada Rajca; Santanu Sarkar; Sandra S Eaton; Gareth R Eaton
Journal:  Chemistry       Date:  2010-05-17       Impact factor: 5.236

6.  Electron paramagnetic resonance studies of functionally active, nitroxide spin-labeled peptide analogues of the C-terminus of a G-protein alpha subunit.

Authors:  Ned Van Eps; Lori L Anderson; Oleg G Kisselev; Thomas J Baranski; Wayne L Hubbell; Garland R Marshall
Journal:  Biochemistry       Date:  2010-08-17       Impact factor: 3.162

7.  Mobility of TOAC spin-labelled peptides binding to the Src SH3 domain studied by paramagnetic NMR.

Authors:  Hanna E Lindfors; Peter E de Koning; Jan Wouter Drijfhout; Brigida Venezia; Marcellus Ubbink
Journal:  J Biomol NMR       Date:  2008-06-17       Impact factor: 2.835

8.  The spin label amino acid TOAC and its uses in studies of peptides: chemical, physicochemical, spectroscopic, and conformational aspects.

Authors:  Shirley Schreier; José Carlos Bozelli; Nélida Marín; Renata F F Vieira; Clóvis R Nakaie
Journal:  Biophys Rev       Date:  2012-01-21
  8 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.