Literature DB >> 11297923

Bacterial RNA polymerase.

S A Darst1.   

Abstract

The recently determined crystal structure of a bacterial core RNA polymerase (RNAP) provides the first glimpse of this family of evolutionarily conserved cellular RNAPs. Using the structure as a framework, a consistent picture of protein-nucleic acid interactions in transcription complexes has been accumulated from cross-linking experiments. The molecule can be viewed as a molecular machine, with distinct structural features hypothesized to perform specific functions. Comparison with the alpha-carbon backbone of a eukaryotic RNAP reveals close structural similarity.

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Year:  2001        PMID: 11297923     DOI: 10.1016/s0959-440x(00)00185-8

Source DB:  PubMed          Journal:  Curr Opin Struct Biol        ISSN: 0959-440X            Impact factor:   6.809


  55 in total

1.  Structural basis of transcription: alpha-amanitin-RNA polymerase II cocrystal at 2.8 A resolution.

Authors:  David A Bushnell; Patrick Cramer; Roger D Kornberg
Journal:  Proc Natl Acad Sci U S A       Date:  2002-01-22       Impact factor: 11.205

2.  The initiation-elongation transition: lateral mobility of RNA in RNA polymerase II complexes is greatly reduced at +8/+9 and absent by +23.

Authors:  Mahadeb Pal; Donal S Luse
Journal:  Proc Natl Acad Sci U S A       Date:  2003-04-28       Impact factor: 11.205

3.  Parameter optimized surfaces (POPS): analysis of key interactions and conformational changes in the ribosome.

Authors:  Franca Fraternali; Luigi Cavallo
Journal:  Nucleic Acids Res       Date:  2002-07-01       Impact factor: 16.971

4.  Architecture of initiation-competent 12-subunit RNA polymerase II.

Authors:  Karim-Jean Armache; Hubert Kettenberger; Patrick Cramer
Journal:  Proc Natl Acad Sci U S A       Date:  2003-05-13       Impact factor: 11.205

5.  Loss of the Rpb4/Rpb7 subcomplex in a mutant form of the Rpb6 subunit shared by RNA polymerases I, II, and III.

Authors:  Qian Tan; Meredith H Prysak; Nancy A Woychik
Journal:  Mol Cell Biol       Date:  2003-05       Impact factor: 4.272

6.  Deletion of switch 3 results in an archaeal RNA polymerase that is defective in transcript elongation.

Authors:  Thomas J Santangelo; John N Reeve
Journal:  J Biol Chem       Date:  2010-05-28       Impact factor: 5.157

Review 7.  Bacterial Transcription as a Target for Antibacterial Drug Development.

Authors:  Cong Ma; Xiao Yang; Peter J Lewis
Journal:  Microbiol Mol Biol Rev       Date:  2016-01-13       Impact factor: 11.056

8.  Analysis of Bacterial Transcription by "Massively Systematic Transcript End Readout," MASTER.

Authors:  Irina O Vvedenskaya; Seth R Goldman; Bryce E Nickels
Journal:  Methods Enzymol       Date:  2018-10-12       Impact factor: 1.600

9.  Altering the interaction between sigma70 and RNA polymerase generates complexes with distinct transcription-elongation properties.

Authors:  Yvonne Berghöfer-Hochheimer; Chi Zen Lu; Carol A Gross
Journal:  Proc Natl Acad Sci U S A       Date:  2005-01-13       Impact factor: 11.205

10.  RNA polymerase: a nexus of gene regulation.

Authors:  John D Helmann
Journal:  Methods       Date:  2009-01       Impact factor: 3.608

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