Literature DB >> 11290139

Translocation of a confined polymer through a hole.

M Muthukumar1.   

Abstract

Based on an analogy between polymer translocation across a free energy barrier associated with polymer worming through a hole and classical nucleation and growth process, the escape time tau is predicted asymptotically to be N(N/rho)(1/3nu). N is the polymer length, rho is the monomer density prior to escape, and nu is the radius of gyration exponent. Monte Carlo simulation data collected in the high salt limit (nu approximately 3/5) are in agreement with the asymptotic law and provide vivid details of the escape.

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Year:  2001        PMID: 11290139     DOI: 10.1103/PhysRevLett.86.3188

Source DB:  PubMed          Journal:  Phys Rev Lett        ISSN: 0031-9007            Impact factor:   9.161


  35 in total

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Authors:  Timothy C Elston
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2.  What drives the translocation of stiff chains?

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Journal:  Proc Natl Acad Sci U S A       Date:  2003-07-08       Impact factor: 11.205

3.  When translocation dynamics becomes anomalous.

Authors:  Ralf Metzler; Joseph Klafter
Journal:  Biophys J       Date:  2003-10       Impact factor: 4.033

4.  Dynamics of molecular motors and polymer translocation with sequence heterogeneity.

Authors:  Yariv Kafri; David K Lubensky; David R Nelson
Journal:  Biophys J       Date:  2004-06       Impact factor: 4.033

5.  Microscopic Kinetics of DNA Translocation through synthetic nanopores.

Authors:  Aleksij Aksimentiev; Jiunn B Heng; Gregory Timp; Klaus Schulten
Journal:  Biophys J       Date:  2004-09       Impact factor: 4.033

6.  Cooperative translocation dynamics of biopolymer chains through nanopores in a membrane: Slow dynamics limit.

Authors:  Hai-Jun Wang; Fang Gu; Xiao-Zhong Hong; Xin-Wu Ba
Journal:  Eur Phys J E Soft Matter       Date:  2010-10-31       Impact factor: 1.890

7.  Deciphering ionic current signatures of DNA transport through a nanopore.

Authors:  Aleksei Aksimentiev
Journal:  Nanoscale       Date:  2010-02-02       Impact factor: 7.790

8.  Computer simulation of polypeptide translocation through a nanopore.

Authors:  Andrzej Sikorski; Piotr Romiszowski
Journal:  J Mol Model       Date:  2005-04-02       Impact factor: 1.810

9.  Ionic current blockades from DNA and RNA molecules in the alpha-hemolysin nanopore.

Authors:  Tom Z Butler; Jens H Gundlach; Mark Troll
Journal:  Biophys J       Date:  2007-08-03       Impact factor: 4.033

10.  Passage times for polymer translocation pulled through a narrow pore.

Authors:  Debabrata Panja; Gerard T Barkema
Journal:  Biophys J       Date:  2007-10-19       Impact factor: 4.033

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