Literature DB >> 11282974

Centromere emergence in evolution.

M Ventura1, N Archidiacono, M Rocchi.   

Abstract

Evolutionary centromere repositioning is a paradox we have recently discovered while studying the conservation of the phylogenetic chromosome IX in primates. Two explanations were proposed: a conservative hypothesis assuming sequential pericentric inversions, and a more challenging assumption involving centromere emergence during evolution. The complex evolutionary history showed by chromosome IX did not allow us to clearly distinguish between these two hypotheses. Here we report comparative studies of chromosome X in two lemur species: the black lemur and the ringtailed lemur. The X chromosome is telocentric in the black lemur and almost metacentric in the ringtailed lemur. The marker order along these chromosomes, however, was found to be perfectly colinear with humans. Our data unequivocally point to centromere emergence as the most likely explanation of centromere repositioning.

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Year:  2001        PMID: 11282974      PMCID: PMC311056          DOI: 10.1101/gr.152101

Source DB:  PubMed          Journal:  Genome Res        ISSN: 1088-9051            Impact factor:   9.043


  27 in total

1.  Evidence for an ancestral alphoid domain on the long arm of human chromosome 2.

Authors:  R Avarello; A Pedicini; A Caiulo; O Zuffardi; M Fraccaro
Journal:  Hum Genet       Date:  1992-05       Impact factor: 4.132

2.  Rapid generation of region specific probes by chromosome microdissection and their application.

Authors:  P S Meltzer; X Y Guan; A Burgess; J M Trent
Journal:  Nat Genet       Date:  1992-04       Impact factor: 38.330

3.  A novel pseudoautosomal gene encoding a putative GTP-binding protein resides in the vicinity of the Xp/Yp telomere.

Authors:  F Gianfrancesco; T Esposito; L Montanini; A Ciccodicola; S Mumm; R Mazzarella; E Rao; S Giglio; G Rappold; A Forabosco
Journal:  Hum Mol Genet       Date:  1998-03       Impact factor: 6.150

4.  A functional neo-centromere formed through activation of a latent human centromere and consisting of non-alpha-satellite DNA.

Authors:  D du Sart; M R Cancilla; E Earle; J I Mao; R Saffery; K M Tainton; P Kalitsis; J Martyn; A E Barry; K H Choo
Journal:  Nat Genet       Date:  1997-06       Impact factor: 38.330

5.  Reciprocal chromosome painting between human and prosimians (Eulemur macaco macaco and E. fulvus mayottensis).

Authors:  S Müller; P C O'Brien; M A Ferguson-Smith; J Wienberg
Journal:  Cytogenet Cell Genet       Date:  1997

6.  Transmission of a fully functional human neocentromere through three generations.

Authors:  C Tyler-Smith; G Gimelli; S Giglio; G Floridia; A Pandya; G Terzoli; P E Warburton; W C Earnshaw; O Zuffardi
Journal:  Am J Hum Genet       Date:  1999-05       Impact factor: 11.025

7.  Comparative mapping of human alphoid sequences in great apes using fluorescence in situ hybridization.

Authors:  N Archidiacono; R Antonacci; R Marzella; P Finelli; A Lonoce; M Rocchi
Journal:  Genomics       Date:  1995-01-20       Impact factor: 5.736

8.  Cross-hybridization of the chromosome 13/21 alpha satellite DNA probe to chromosome 22 in the prenatal screening of common chromosomal aneuploidies by FISH.

Authors:  Y Verlinsky; N Ginsberg; M Chmura; M Freidine; M White; C Strom; A Kuliev
Journal:  Prenat Diagn       Date:  1995-09       Impact factor: 3.050

9.  Neocentromere activity of structurally acentric mini-chromosomes in Drosophila.

Authors:  B C Williams; T D Murphy; M L Goldberg; G H Karpen
Journal:  Nat Genet       Date:  1998-01       Impact factor: 38.330

Review 10.  Emerging patterns of comparative genome organization in some mammalian species as revealed by Zoo-FISH.

Authors:  B P Chowdhary; T Raudsepp; L Frönicke; H Scherthan
Journal:  Genome Res       Date:  1998-06       Impact factor: 9.043

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  58 in total

Review 1.  Chromosomal dynamics of human neocentromere formation.

Authors:  Peter E Warburton
Journal:  Chromosome Res       Date:  2004       Impact factor: 5.239

2.  Genome-wide characterization of centromeric satellites from multiple mammalian genomes.

Authors:  Can Alkan; Maria Francesca Cardone; Claudia Rita Catacchio; Francesca Antonacci; Stephen J O'Brien; Oliver A Ryder; Stefania Purgato; Monica Zoli; Giuliano Della Valle; Evan E Eichler; Mario Ventura
Journal:  Genome Res       Date:  2010-11-16       Impact factor: 9.043

3.  Chromosome size and origin as determinants of the level of CENP-A incorporation into human centromeres.

Authors:  Danielle V Irvine; David J Amor; Jo Perry; Nicolas Sirvent; Florence Pedeutour; K H Andy Choo; Richard Saffery
Journal:  Chromosome Res       Date:  2004       Impact factor: 5.239

4.  In-depth sequence analysis of the tomato chromosome 12 centromeric region: identification of a large CAA block and characterization of pericentromere retrotranposons.

Authors:  Tae-Jin Yang; Seunghee Lee; Song-Bin Chang; Yeisoo Yu; Hans de Jong; Rod A Wing
Journal:  Chromosoma       Date:  2005-06-17       Impact factor: 4.316

Review 5.  Neocentromeres: new insights into centromere structure, disease development, and karyotype evolution.

Authors:  Owen J Marshall; Anderly C Chueh; Lee H Wong; K H Andy Choo
Journal:  Am J Hum Genet       Date:  2008-02       Impact factor: 11.025

6.  Evolutionary and clinical neocentromeres: two faces of the same coin?

Authors:  Oronzo Capozzi; Stefania Purgato; Ludovica Verdun di Cantogno; Enrico Grosso; Roberto Ciccone; Orsetta Zuffardi; Giuliano Della Valle; Mariano Rocchi
Journal:  Chromosoma       Date:  2008-02-15       Impact factor: 4.316

7.  New insights into centromere organization and evolution from the white-cheeked gibbon and marmoset.

Authors:  A Cellamare; C R Catacchio; C Alkan; G Giannuzzi; F Antonacci; M F Cardone; G Della Valle; M Malig; M Rocchi; E E Eichler; M Ventura
Journal:  Mol Biol Evol       Date:  2009-05-08       Impact factor: 16.240

8.  A satellite-like sequence, representing a "clone gap" in the human genome, was likely involved in the seeding of a novel centromere in macaque.

Authors:  Lucia Carbone; Pietro D'addabbo; Maria Francesca Cardone; Maria Grazia Teti; Doriana Misceo; Gery M Vessere; Pieter J de Jong; Mariano Rocchi
Journal:  Chromosoma       Date:  2008-12-02       Impact factor: 4.316

9.  Human centromere repositioning "in progress".

Authors:  David J Amor; Karen Bentley; Jacinta Ryan; Jo Perry; Lee Wong; Howard Slater; K H Andy Choo
Journal:  Proc Natl Acad Sci U S A       Date:  2004-04-14       Impact factor: 11.205

10.  Comparative chromosome painting map between two Ryukyu spiny rat species, Tokudaia osimensis and Tokudaia tokunoshimensis (Muridae, Rodentia).

Authors:  Taro Nakamura; Asato Kuroiwa; Chizuko Nishida-Umehara; Kazumi Matsubara; Fumio Yamada; Yoichi Matsuda
Journal:  Chromosome Res       Date:  2007-08-23       Impact factor: 5.239

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