Literature DB >> 11279087

Porcine carbonyl reductase. structural basis for a functional monomer in short chain dehydrogenases/reductases.

D Ghosh1, M Sawicki, V Pletnev, M Erman, S Ohno, S Nakajin, W L Duax.   

Abstract

Porcine testicular carbonyl reductase (PTCR) belongs to the short chain dehydrogenases/reductases (SDR) superfamily and catalyzes the NADPH-dependent reduction of ketones on steroids and prostaglandins. The enzyme shares nearly 85% sequence identity with the NADPH-dependent human 15-hydroxyprostaglandin dehydrogenase/carbonyl reductase. The tertiary structure of the enzyme at 2.3 A reveals a fold characteristic of the SDR superfamily that uses a Tyr-Lys-Ser triad as catalytic residues, but exhibits neither the functional homotetramer nor the homodimer that distinguish all SDRs. It is the first known monomeric structure in the SDR superfamily. In PTCR, which is also active as a monomer, a 41-residue insertion immediately before the catalytic Tyr describes an all-helix subdomain that packs against interfacial helices, eliminating the four-helix bundle interface conserved in the superfamily. An additional anti-parallel strand in the PTCR structure also blocks the other strand-mediated interface. These novel structural features provide the basis for the scaffolding of one catalytic site within a single molecule of the enzyme.

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Year:  2001        PMID: 11279087     DOI: 10.1074/jbc.M100538200

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  29 in total

1.  Short-chain dehydrogenase/reductase (SDR) relationships: a large family with eight clusters common to human, animal, and plant genomes.

Authors:  Yvonne Kallberg; Udo Oppermann; Hans Jörnvall; Bengt Persson
Journal:  Protein Sci       Date:  2002-03       Impact factor: 6.725

2.  Tsc10p and FVT1: topologically distinct short-chain reductases required for long-chain base synthesis in yeast and mammals.

Authors:  Sita D Gupta; Kenneth Gable; Gongshe Han; Anna Borovitskaya; Luke Selby; Teresa M Dunn; Jeffrey M Harmon
Journal:  J Lipid Res       Date:  2009-01-13       Impact factor: 5.922

3.  Removal of substrate inhibition and increase in maximal velocity in the short chain dehydrogenase/reductase salutaridine reductase involved in morphine biosynthesis.

Authors:  Jörg Ziegler; Wolfgang Brandt; René Geissler; Peter J Facchini
Journal:  J Biol Chem       Date:  2009-07-30       Impact factor: 5.157

4.  Crystallization and preliminary X-ray crystallographic studies of pig heart carbonyl reductase.

Authors:  Ken-ichi Aoki; Nobutada Tanaka; Shuhei Ishikura; Naoko Araki; Yorishige Imamura; Akira Hara; Kazuo T Nakamura
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2006-09-30

5.  In silico structure-function analysis of pathological variation in the HSD11B2 gene sequence.

Authors:  Jonathan R Manning; Matthew A Bailey; Dinesh C Soares; Donald R Dunbar; John J Mullins
Journal:  Physiol Genomics       Date:  2010-06-22       Impact factor: 3.107

6.  Homology modeling and site-directed mutagenesis reveal catalytic key amino acids of 3beta-hydroxysteroid-dehydrogenase/C4-decarboxylase from Arabidopsis.

Authors:  Alain Rahier; Marc Bergdoll; Geneviève Génot; Florence Bouvier; Bilal Camara
Journal:  Plant Physiol       Date:  2009-02-13       Impact factor: 8.340

7.  Structural basis for substrate specificity in human monomeric carbonyl reductases.

Authors:  Ewa S Pilka; Frank H Niesen; Wen Hwa Lee; Yasser El-Hawari; James E Dunford; Grazyna Kochan; Vladimir Wsol; Hans-Joerg Martin; Edmund Maser; Udo Oppermann
Journal:  PLoS One       Date:  2009-10-20       Impact factor: 3.240

8.  Engineering cofactor preference of ketone reducing biocatalysts: A mutagenesis study on a γ-diketone reductase from the yeast Saccharomyces cerevisiae serving as an example.

Authors:  Michael Katzberg; Nàdia Skorupa-Parachin; Marie-Françoise Gorwa-Grauslund; Martin Bertau
Journal:  Int J Mol Sci       Date:  2010-04-14       Impact factor: 5.923

9.  Estradiol-17beta, prostaglandin E2 (PGE2), and the PGE2 receptor are involved in PGE2 positive feedback loop in the porcine endometrium.

Authors:  Agnieszka Waclawik; Henry N Jabbour; Agnieszka Blitek; Adam J Ziecik
Journal:  Endocrinology       Date:  2009-04-09       Impact factor: 4.736

Review 10.  Medium- and short-chain dehydrogenase/reductase gene and protein families : the SDR superfamily: functional and structural diversity within a family of metabolic and regulatory enzymes.

Authors:  K L Kavanagh; H Jörnvall; B Persson; U Oppermann
Journal:  Cell Mol Life Sci       Date:  2008-12       Impact factor: 9.261

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