Literature DB >> 11265756

Decoding apparatus for eukaryotic selenocysteine insertion.

R M Tujebajeva1, P R Copeland, X M Xu, B A Carlson, J W Harney, D M Driscoll, D L Hatfield, M J Berry.   

Abstract

Decoding UGA as selenocysteine requires a unique tRNA, a specialized elongation factor, and specific secondary structures in the mRNA, termed SECIS elements. Eukaryotic SECIS elements are found in the 3' untranslated region of selenoprotein mRNAs while those in prokaryotes occur immediately downstream of UGA. Consequently, a single eukaryotic SECIS element can serve multiple UGA codons, whereas prokaryotic SECIS elements only function for the adjacent UGA, suggesting distinct mechanisms for recoding in the two kingdoms. We have identified and characterized the first eukaryotic selenocysteyl-tRNA-specific elongation factor. This factor forms a complex with mammalian SECIS binding protein 2, and these two components function together in selenocysteine incorporation in mammalian cells. Expression of the two functional domains of the bacterial elongation factor-SECIS binding protein as two separate proteins in eukaryotes suggests a mechanism for rapid exchange of charged for uncharged selenocysteyl-tRNA-elongation factor complex, allowing a single SECIS element to serve multiple UGA codons.

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Year:  2000        PMID: 11265756      PMCID: PMC1084265          DOI: 10.1093/embo-reports/kvd033

Source DB:  PubMed          Journal:  EMBO Rep        ISSN: 1469-221X            Impact factor:   8.807


  19 in total

Review 1.  Biosynthesis of selenoproteins--an overview.

Authors:  A Böck
Journal:  Biofactors       Date:  2000       Impact factor: 6.113

2.  Aminoacyl-transfer RNA populations in mammalian cells chromatographic profiles and patterns of codon recognition.

Authors:  D Hatfield; C R Matthews; M Rice
Journal:  Biochim Biophys Acta       Date:  1979-10-25

3.  Identification of a novel translation factor necessary for the incorporation of selenocysteine into protein.

Authors:  K Forchhammer; W Leinfelder; A Böck
Journal:  Nature       Date:  1989-11-23       Impact factor: 49.962

4.  Multiple sequence alignment with hierarchical clustering.

Authors:  F Corpet
Journal:  Nucleic Acids Res       Date:  1988-11-25       Impact factor: 16.971

5.  A tripeptide 'anticodon' deciphers stop codons in messenger RNA.

Authors:  K Ito; M Uno; Y Nakamura
Journal:  Nature       Date:  2000-02-10       Impact factor: 49.962

6.  tRNA is entrapped in similar, but distinct, nuclear and cytoplasmic ribonucleoprotein complexes, both of which contain vigilin and elongation factor 1 alpha.

Authors:  C Kruse; A Grünweller; D K Willkomm; T Pfeiffer; R K Hartmann; P K Müller
Journal:  Biochem J       Date:  1998-02-01       Impact factor: 3.857

7.  Selenoprotein P expression, purification, and immunochemical characterization.

Authors:  R M Tujebajeva; J W Harney; M J Berry
Journal:  J Biol Chem       Date:  2000-03-03       Impact factor: 5.157

8.  Functional interaction of mammalian valyl-tRNA synthetase with elongation factor EF-1alpha in the complex with EF-1H.

Authors:  B S Negrutskii; V F Shalak; P Kerjan; A V El'skaya; M Mirande
Journal:  J Biol Chem       Date:  1999-02-19       Impact factor: 5.157

9.  Identification of a selenocysteyl-tRNA(Ser) in mammalian cells that recognizes the nonsense codon, UGA.

Authors:  B J Lee; P J Worland; J N Davis; T C Stadtman; D L Hatfield
Journal:  J Biol Chem       Date:  1989-06-15       Impact factor: 5.157

10.  Type I iodothyronine deiodinase is a selenocysteine-containing enzyme.

Authors:  M J Berry; L Banu; P R Larsen
Journal:  Nature       Date:  1991-01-31       Impact factor: 49.962

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  106 in total

1.  Insight into mammalian selenocysteine insertion: domain structure and ribosome binding properties of Sec insertion sequence binding protein 2.

Authors:  P R Copeland; V A Stepanik; D M Driscoll
Journal:  Mol Cell Biol       Date:  2001-03       Impact factor: 4.272

2.  In silico identification of novel selenoproteins in the Drosophila melanogaster genome.

Authors:  S Castellano; N Morozova; M Morey; M J Berry; F Serras; M Corominas; R Guigó
Journal:  EMBO Rep       Date:  2001-08       Impact factor: 8.807

Review 3.  The renaissance of aminoacyl-tRNA synthesis.

Authors:  M Ibba; D Söll
Journal:  EMBO Rep       Date:  2001-05       Impact factor: 8.807

Review 4.  How selenium has altered our understanding of the genetic code.

Authors:  Dolph L Hatfield; Vadim N Gladyshev
Journal:  Mol Cell Biol       Date:  2002-06       Impact factor: 4.272

5.  Mutations in eukaryotic release factors 1 and 3 act as general nonsense suppressors in Drosophila.

Authors:  Anna T Chao; Herman A Dierick; Tracie M Addy; Amy Bejsovec
Journal:  Genetics       Date:  2003-10       Impact factor: 4.562

Review 6.  Regulation of gene expression by stop codon recoding: selenocysteine.

Authors:  Paul R Copeland
Journal:  Gene       Date:  2003-07-17       Impact factor: 3.688

7.  A -1 ribosomal frameshift element that requires base pairing across four kilobases suggests a mechanism of regulating ribosome and replicase traffic on a viral RNA.

Authors:  Jennifer K Barry; W Allen Miller
Journal:  Proc Natl Acad Sci U S A       Date:  2002-07-30       Impact factor: 11.205

8.  Efficiency of mammalian selenocysteine incorporation.

Authors:  Anupama Mehta; Cheryl M Rebsch; Scott A Kinzy; Julia E Fletcher; Paul R Copeland
Journal:  J Biol Chem       Date:  2004-06-30       Impact factor: 5.157

9.  Conserved selenoprotein synthesis is not critical for oxidative stress defence and the lifespan of Drosophila.

Authors:  Mitsuko Hirosawa-Takamori; Ho-Ryun Chung; Herbert Jäckle
Journal:  EMBO Rep       Date:  2004-02-20       Impact factor: 8.807

10.  Selenocysteine insertion sequence (SECIS)-binding protein 2 alters conformational dynamics of residues involved in tRNA accommodation in 80 S ribosomes.

Authors:  Kelvin Caban; Paul R Copeland
Journal:  J Biol Chem       Date:  2012-02-03       Impact factor: 5.157

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