Literature DB >> 11256957

Protein-coenzyme interactions in adenosylcobalamin-dependent glutamate mutase.

M S Huhta1, H P Chen, C Hemann, C R Hille, E N Marsh.   

Abstract

Glutamate mutase catalyses an unusual isomerization involving free-radical intermediates that are generated by homolysis of the cobalt-carbon bond of the coenzyme adenosylcobalamin (coenzyme B(12)). A variety of techniques have been used to examine the interaction between the protein and adenosylcobalamin, and between the protein and the products of coenzyme homolysis, cob(II)alamin and 5'-deoxyadenosine. These include equilibrium gel filtration, isothermal titration calorimetry, and resonance Raman, UV-visible and EPR spectroscopies. The thermodynamics of adenosylcobalamin binding to the protein have been examined and appear to be entirely entropy-driven, with DeltaS=109 J.mol(-1).K(-1). The cobalt-carbon bond stretching frequency is unchanged upon coenzyme binding to the protein, arguing against a ground-state destabilization of the cobalt-carbon bond of adenosylcobalamin by the protein. However, reconstitution of the enzyme with cob(II)alamin and 5'-deoxyadenosine, the two stable intermediates formed subsequent to homolysis, results in the blue-shifting of two of the bands comprising the UV-visible spectrum of the corrin ring. The most plausible interpretation of this result is that an interaction between the protein, 5'-deoxyadenosine and cob(II)alamin introduces a distortion into the ring corrin that perturbs its electronic properties.

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Year:  2001        PMID: 11256957      PMCID: PMC1221720          DOI: 10.1042/0264-6021:3550131

Source DB:  PubMed          Journal:  Biochem J        ISSN: 0264-6021            Impact factor:   3.857


  21 in total

Review 1.  Coenzyme B12 (cobalamin)-dependent enzymes.

Authors:  E N Marsh
Journal:  Essays Biochem       Date:  1999       Impact factor: 8.000

2.  Review Article Coenzyme-B(12)-Dependent Glutamate Mutase.

Authors: 
Journal:  Bioorg Chem       Date:  2000-06       Impact factor: 5.275

3.  Evidence that cobalt-carbon bond homolysis is coupled to hydrogen atom abstraction from substrate in methylmalonyl-CoA mutase.

Authors:  R Padmakumar; R Padmakumar; R Banerjee
Journal:  Biochemistry       Date:  1997-03-25       Impact factor: 3.162

4.  Studies on the catalysis of carbon-cobalt bond homolysis by ribonucleoside triphosphate reductase: evidence for concerted carbon-cobalt bond homolysis and thiyl radical formation.

Authors:  S S Licht; S Booker; J Stubbe
Journal:  Biochemistry       Date:  1999-01-26       Impact factor: 3.162

5.  Adenosylcobalamin-dependent glutamate mutase: examination of substrate and coenzyme binding in an engineered fusion protein possessing simplified subunit structure and kinetic properties.

Authors:  H P Chen; E N Marsh
Journal:  Biochemistry       Date:  1997-12-02       Impact factor: 3.162

6.  Adenosylcobalamin-dependent glutamate mutase from Clostridium tetanomorphum. Overexpression in Escherichia coli, purification, and characterization of the recombinant enzyme.

Authors:  D E Holloway; E N Marsh
Journal:  J Biol Chem       Date:  1994-08-12       Impact factor: 5.157

7.  Thermodynamic and kinetic characterization of Co-C bond homolysis catalyzed by coenzyme B(12)-dependent methylmalonyl-CoA mutase.

Authors:  S Chowdhury; R Banerjee
Journal:  Biochemistry       Date:  2000-07-11       Impact factor: 3.162

8.  Glutamate mutase from Clostridium cochlearium: the structure of a coenzyme B12-dependent enzyme provides new mechanistic insights.

Authors:  R Reitzer; K Gruber; G Jogl; U G Wagner; H Bothe; W Buckel; C Kratky
Journal:  Structure       Date:  1999-08-15       Impact factor: 5.006

9.  Conservation of the conformation of the porphyrin macrocycle in hemoproteins.

Authors:  W Jentzen; J G Ma; J A Shelnutt
Journal:  Biophys J       Date:  1998-02       Impact factor: 4.033

10.  Coordination of a histidine residue of the protein-component S to the cobalt atom in coenzyme B12-dependent glutamate mutase from Clostridium cochlearium.

Authors:  O Zelder; B Beatrix; F Kroll; W Buckel
Journal:  FEBS Lett       Date:  1995-08-07       Impact factor: 4.124

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  11 in total

1.  DFT analysis of co-alkyl and co-adenosyl vibrational modes in B12-cofactors.

Authors:  Pawel M Kozlowski; Tadeusz Andruniow; Andrzej A Jarzecki; Marek Z Zgierski; Thomas G Spiro
Journal:  Inorg Chem       Date:  2006-07-10       Impact factor: 5.165

2.  Characterization of protein contributions to cobalt-carbon bond cleavage catalysis in adenosylcobalamin-dependent ethanolamine ammonia-lyase by using photolysis in the ternary complex.

Authors:  Wesley D Robertson; Miao Wang; Kurt Warncke
Journal:  J Am Chem Soc       Date:  2011-04-14       Impact factor: 15.419

Review 3.  Adenosyl radical: reagent and catalyst in enzyme reactions.

Authors:  E Neil G Marsh; Dustin P Patterson; Lei Li
Journal:  Chembiochem       Date:  2010-03-22       Impact factor: 3.164

Review 4.  Adenosylcobalamin enzymes: theory and experiment begin to converge.

Authors:  E Neil G Marsh; Gabriel D Román Meléndez
Journal:  Biochim Biophys Acta       Date:  2012-04-03

5.  Resonance Raman spectroscopic study of the interaction between Co(II)rrinoids and the ATP:corrinoid adenosyltransferase PduO from Lactobacillus reuteri.

Authors:  Kiyoung Park; Paola E Mera; Jorge C Escalante-Semerena; Thomas C Brunold
Journal:  J Biol Inorg Chem       Date:  2016-07-06       Impact factor: 3.358

6.  Photolysis of adenosylcobalamin and radical pair recombination in ethanolamine ammonia-lyase probed on the micro- to millisecond time scale by using time-resolved optical absorption spectroscopy.

Authors:  Wesley D Robertson; Kurt Warncke
Journal:  Biochemistry       Date:  2009-01-13       Impact factor: 3.162

7.  Molecular basis for the action of a dietary flavonoid revealed by the comprehensive identification of apigenin human targets.

Authors:  Daniel Arango; Kengo Morohashi; Alper Yilmaz; Kouji Kuramochi; Arti Parihar; Bledi Brahimaj; Erich Grotewold; Andrea I Doseff
Journal:  Proc Natl Acad Sci U S A       Date:  2013-05-22       Impact factor: 11.205

8.  Changes in the free energy profile of glutamate mutase imparted by the mutation of an active site arginine residue to lysine.

Authors:  Anjali Patwardhan; E Neil G Marsh
Journal:  Arch Biochem Biophys       Date:  2007-01-31       Impact factor: 4.013

9.  The Transcription Factor CarH Safeguards Use of Adenosylcobalamin as a Light Sensor by Altering the Photolysis Products.

Authors:  Marco Jost; Jeffrey H Simpson; Catherine L Drennan
Journal:  Biochemistry       Date:  2015-05-19       Impact factor: 3.162

10.  A conformational sampling model for radical catalysis in pyridoxal phosphate- and cobalamin-dependent enzymes.

Authors:  Binuraj R K Menon; Karl Fisher; Stephen E J Rigby; Nigel S Scrutton; David Leys
Journal:  J Biol Chem       Date:  2014-09-11       Impact factor: 5.157

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