Literature DB >> 11196574

Prebiotic methylation and the evolution of methyl transfer reactions in living cells.

T G Waddell1, L L Eilders, B P Patel, M Sims.   

Abstract

An hypothesis is presented for the prebiotic origin of methyl groups and the evolution of methyl transfer reactions in living cells. This hypothesis, described in terms of prebiotic and early biotic chemical evolution, is based on experimental observations in our lab and in those of others, and on the mechanisms of enzymatic methyl transfer reactions that occur in living cells. Of particular interest is our demonstration of the reductive methylation of ethanolamine and glycine in aqueous solution by excess formaldehyde. These reactions, involving prebiotic compounds and conditions, are mechanistically analogous to the de novo origin of methyl groups in modern cells by reduction of methylene tetrahydrofolate. Furthermore, modern cellular methyl transfers from S-adenosylmethionine to amine nitrogen may involve formaldehyde as an intermediate and subsequent reductive methylation, analogous to the prebiotic chemistry observed herein.

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Year:  2000        PMID: 11196574     DOI: 10.1023/a:1026523222285

Source DB:  PubMed          Journal:  Orig Life Evol Biosph        ISSN: 0169-6149            Impact factor:   1.950


  12 in total

1.  Prebiotic transamination.

Authors:  J C Bishop; S D Cross; T G Waddell
Journal:  Orig Life Evol Biosph       Date:  1997-08       Impact factor: 1.950

2.  The synthesis of glutamic acid in the absence of enzymes: implications for biogenesis.

Authors:  H Morowitz; E Peterson; S Chang
Journal:  Orig Life Evol Biosph       Date:  1995-08       Impact factor: 1.950

3.  5-methyltetrahydrofolic acid is not a methyl donor for biogenic amines: enzymatic formation of formaldehyde.

Authors:  E Meller; H Rosengarten; A J Friedhoff; R D Stebbins; R Silber
Journal:  Science       Date:  1975-01-17       Impact factor: 47.728

4.  The puzzle of the Krebs citric acid cycle: assembling the pieces of chemically feasible reactions, and opportunism in the design of metabolic pathways during evolution.

Authors:  E Meléndez-Hevia; T G Waddell; M Cascante
Journal:  J Mol Evol       Date:  1996-09       Impact factor: 2.395

5.  Theoretical approaches to the evolutionary optimization of glycolysis: thermodynamic and kinetic constraints.

Authors:  R Heinrich; F Montero; E Klipp; T G Waddell; E Meléndez-Hevia
Journal:  Eur J Biochem       Date:  1997-01-15

6.  Pyridoxalphosphate and non-enzymatic synthesis of methionine.

Authors:  A Pittoni; F F Rubaltelli
Journal:  Int Z Vitaminforsch       Date:  1967

7.  Tryptoline formation by a preparation from brain with 5-methyltetrahydrofolic acid and tryptamine.

Authors:  R J Wyatt; E Erdelyi; J R DoAmaral; G R Elliott; J Renson; J D Barchas
Journal:  Science       Date:  1975-03-07       Impact factor: 47.728

8.  Prebiotic syntheses of vitamin coenzymes: I. Cysteamine and 2-mercaptoethanesulfonic acid (coenzyme M).

Authors:  S L Miller; G Schlesinger
Journal:  J Mol Evol       Date:  1993-04       Impact factor: 2.395

Review 9.  Phospholipid methylation and biological signal transmission.

Authors:  F Hirata; J Axelrod
Journal:  Science       Date:  1980-09-05       Impact factor: 47.728

10.  Prebiotic synthesis of 5-substituted uracils: a bridge between the RNA world and the DNA-protein world.

Authors:  M P Robertson; S L Miller
Journal:  Science       Date:  1995-05-05       Impact factor: 47.728

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  12 in total

Review 1.  16S rRNA Methyltransferases as Novel Drug Targets Against Tuberculosis.

Authors:  M R Salaikumaran; Veena P Badiger; V L S Prasad Burra
Journal:  Protein J       Date:  2022-02-03       Impact factor: 2.371

2.  Prebiotic synthesis of methionine and other sulfur-containing organic compounds on the primitive Earth: a contemporary reassessment based on an unpublished 1958 Stanley Miller experiment.

Authors:  Eric T Parker; H James Cleaves; Michael P Callahan; Jason P Dworkin; Daniel P Glavin; Antonio Lazcano; Jeffrey L Bada
Journal:  Orig Life Evol Biosph       Date:  2010-11-10       Impact factor: 1.950

3.  Natural history of S-adenosylmethionine-binding proteins.

Authors:  Piotr Z Kozbial; Arcady R Mushegian
Journal:  BMC Struct Biol       Date:  2005-10-14

4.  Residues in human arsenic (+3 oxidation state) methyltransferase forming potential hydrogen bond network around S-adenosylmethionine.

Authors:  Xiangli Li; Jing Cao; Shuping Wang; Zhirong Geng; Xiaoli Song; Xin Hu; Zhilin Wang
Journal:  PLoS One       Date:  2013-10-04       Impact factor: 3.240

5.  Comparative genomics of nucleotide metabolism: a tour to the past of the three cellular domains of life.

Authors:  Dagoberto Armenta-Medina; Lorenzo Segovia; Ernesto Perez-Rueda
Journal:  BMC Genomics       Date:  2014-09-17       Impact factor: 3.969

6.  Methylation deficiency disrupts biological rhythms from bacteria to humans.

Authors:  Jean-Michel Fustin; Shiqi Ye; Christin Rakers; Kensuke Kaneko; Kazuki Fukumoto; Mayu Yamano; Marijke Versteven; Ellen Grünewald; Samantha J Cargill; T Katherine Tamai; Yao Xu; Maria Luísa Jabbur; Rika Kojima; Melisa L Lamberti; Kumiko Yoshioka-Kobayashi; David Whitmore; Stephanie Tammam; P Lynne Howell; Ryoichiro Kageyama; Takuya Matsuo; Ralf Stanewsky; Diego A Golombek; Carl Hirschie Johnson; Hideaki Kakeya; Gerben van Ooijen; Hitoshi Okamura
Journal:  Commun Biol       Date:  2020-05-06

7.  A natural riboswitch scaffold with self-methylation activity.

Authors:  Laurin Flemmich; Sarah Heel; Sarah Moreno; Kathrin Breuker; Ronald Micura
Journal:  Nat Commun       Date:  2021-06-23       Impact factor: 14.919

8.  SAMbinder: A Web Server for Predicting S-Adenosyl-L-Methionine Binding Residues of a Protein From Its Amino Acid Sequence.

Authors:  Piyush Agrawal; Gaurav Mishra; Gajendra P S Raghava
Journal:  Front Pharmacol       Date:  2020-01-30       Impact factor: 5.810

9.  Site-specific RNA methylation by a methyltransferase ribozyme.

Authors:  Carolin P M Scheitl; Mohammad Ghaem Maghami; Ann-Kathrin Lenz; Claudia Höbartner
Journal:  Nature       Date:  2020-10-28       Impact factor: 49.962

Review 10.  Coenzymes and Their Role in the Evolution of Life.

Authors:  Andreas Kirschning
Journal:  Angew Chem Int Ed Engl       Date:  2020-10-23       Impact factor: 15.336

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