Literature DB >> 11168720

Filter-based PNA in situ hybridization for rapid detection, identification and enumeration of specific micro-organisms.

H Perry-O'Keefe1, H Stender, A Broomer, K Oliveira, J Coull, J J Hyldig-Nielsen.   

Abstract

AIMS: A method for rapid and simultaneous detection, identification and enumeration of specific micro-organisms using Peptide Nucleic Acid (PNA) probes is presented. METHODS AND
RESULTS: The method is based on a membrane filtration technique. The membrane filter was incubated for a short period of time. The microcolonies were analysed by in situ hybridization, using peroxidase-labelled PNA probes targeting a species-specific rRNA sequence, and visualized by a chemiluminescent reaction. Microcolonies were observed as small spots of light on film, thereby providing simultaneous detection, identification and enumeration. The method showed 95-100% correlation to standard plate counts along with definitive identification due to the specificity of the probe.
CONCLUSION: Using the same protocol, results were generated approximately three times faster than culture methods for Gram-positive and -negative bacterial species and yeast species. SIGNIFICANCE AND IMPACT OF THE STUDY: The method is an improvement on the current membrane filtration technique, providing rapid determination of the level of specific pathogens, spoilage or indicator micro-organisms.

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Year:  2001        PMID: 11168720     DOI: 10.1046/j.1365-2672.2001.01230.x

Source DB:  PubMed          Journal:  J Appl Microbiol        ISSN: 1364-5072            Impact factor:   3.772


  16 in total

1.  Use of DNA and peptide nucleic acid molecular beacons for detection and quantification of rRNA in solution and in whole cells.

Authors:  Chuanwu Xi; Michal Balberg; Stephen A Boppart; Lutgarde Raskin
Journal:  Appl Environ Microbiol       Date:  2003-09       Impact factor: 4.792

Review 2.  PNA Technology.

Authors:  Peter E Nielsen
Journal:  Mol Biotechnol       Date:  2004-03       Impact factor: 2.695

3.  Design and evaluation of 16S rRNA-targeted peptide nucleic acid probes for whole-cell detection of members of the genus Listeria.

Authors:  Byron F Brehm-Stecher; Jens J Hyldig-Nielsen; Eric A Johnson
Journal:  Appl Environ Microbiol       Date:  2005-09       Impact factor: 4.792

4.  Rapid diagnosis of bacterial meningitis by real-time PCR and fluorescence in situ hybridization.

Authors:  Sven Poppert; Andreas Essig; Barbara Stoehr; Adelinde Steingruber; Beate Wirths; Stefan Juretschko; Udo Reischl; Nele Wellinghausen
Journal:  J Clin Microbiol       Date:  2005-07       Impact factor: 5.948

Review 5.  Detection and identification of microorganisms in wine: a review of molecular techniques.

Authors:  Melissa L Ivey; Trevor G Phister
Journal:  J Ind Microbiol Biotechnol       Date:  2011-08-07       Impact factor: 3.346

6.  Evaluation of peptide nucleic acid-fluorescence in situ hybridization for identification of clinically relevant mycobacteria in clinical specimens and tissue sections.

Authors:  Michael Lefmann; Birgitta Schweickert; Petra Buchholz; Ulf B Göbel; Timo Ulrichs; Peter Seiler; Dirk Theegarten; Annette Moter
Journal:  J Clin Microbiol       Date:  2006-10       Impact factor: 5.948

7.  Targeting species-specific low-affinity 16S rRNA binding sites by using peptide nucleic acids for detection of Legionellae in biofilms.

Authors:  Sandra A Wilks; C William Keevil
Journal:  Appl Environ Microbiol       Date:  2006-08       Impact factor: 4.792

8.  Rapid detection, identification, and enumeration of Escherichia coli cells in municipal water by chemiluminescent in situ hybridization.

Authors:  H Stender; A J Broomer; K Oliveira; H Perry-O'Keefe; J J Hyldig-Nielsen; A Sage; J Coull
Journal:  Appl Environ Microbiol       Date:  2001-01       Impact factor: 4.792

9.  Validation of a fluorescence in situ hybridization method using peptide nucleic acid probes for detection of Helicobacter pylori clarithromycin resistance in gastric biopsy specimens.

Authors:  Laura Cerqueira; Ricardo M Fernandes; Rui M Ferreira; Mónica Oleastro; Fátima Carneiro; Catarina Brandão; Pedro Pimentel-Nunes; Mário Dinis-Ribeiro; Céu Figueiredo; Charles W Keevil; Maria J Vieira; Nuno F Azevedo
Journal:  J Clin Microbiol       Date:  2013-04-17       Impact factor: 5.948

10.  DNA mimics for the rapid identification of microorganisms by fluorescence in situ hybridization (FISH).

Authors:  Laura Cerqueira; Nuno F Azevedo; Carina Almeida; Tatiana Jardim; Charles William Keevil; Maria J Vieira
Journal:  Int J Mol Sci       Date:  2008-10-20       Impact factor: 5.923

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