Literature DB >> 11125072

A comprehensive BAC resource.

S Zhao1.   

Abstract

The Human Genome Project has generated extensive map and sequence data for a large number of Bacterial Artificial Chromosome (BAC) clones. In order to maximize the efficient use of the data and to minimize the redundant work for the research community, The Institute for Genomic Research (TIGR) comprehensive BAC resource (cBACr) (http://www.tigr.org/tdb/BacResource/BAC_resourc e_intro. html) was built as an expansion of the TIGR human BAC ends database. This resource collects, integrates and reports the information on library, maps, sequence, annotation and functions for each human and mouse BAC. The current database contains 635 016 human BACs and 265 617 mouse BACs that were characterized by various approaches, among which 22 705 human clones and 1000 mouse clones have sequence and annotation data.

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Year:  2001        PMID： 11125072      PMCID： PMC29824          DOI： 10.1093/nar/29.1.141

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN： 0305-1048            Impact factor:   16.971


  13 in total

1.  Cloning and stable maintenance of 300-kilobase-pair fragments of human DNA in Escherichia coli using an F-factor-based vector.

Authors:  H Shizuya; B Birren; U J Kim; V Mancino; T Slepak; Y Tachiiri; M Simon
Journal:  Proc Natl Acad Sci U S A       Date:  1992-09-15       Impact factor: 11.205

2.  Human BAC ends.

Authors:  S Zhao
Journal:  Nucleic Acids Res       Date:  2000-01-01       Impact factor: 16.971

3.  Human BAC ends quality assessment and sequence analyses.

Authors:  S Zhao; J Malek; G Mahairas; L Fu; W Nierman; J C Venter; M D Adams
Journal:  Genomics       Date:  2000-02-01       Impact factor: 5.736

4.  An improved approach for construction of bacterial artificial chromosome libraries.

Authors:  K Osoegawa; P Y Woon; B Zhao; E Frengen; M Tateno; J J Catanese; P J de Jong
Journal:  Genomics       Date:  1998-08-15       Impact factor: 5.736

5.  Construction and characterization of a human bacterial artificial chromosome library.

Authors:  U J Kim; B W Birren; T Slepak; V Mancino; C Boysen; H L Kang; M I Simon; H Shizuya
Journal:  Genomics       Date:  1996-06-01       Impact factor: 5.736

6.  A bacterial artificial chromosome-based framework contig map of human chromosome 22q.

Authors:  U J Kim; H Shizuya; H L Kang; S S Choi; C L Garrett; L J Smink; B W Birren; J R Korenberg; I Dunham; M I Simon
Journal:  Proc Natl Acad Sci U S A       Date:  1996-06-25       Impact factor: 11.205

7.  Bacterial artificial chromosome libraries for mouse sequencing and functional analysis.

Authors:  K Osoegawa; M Tateno; P Y Woon; E Frengen; A G Mammoser; J J Catanese; Y Hayashizaki; P J de Jong
Journal:  Genome Res       Date:  2000-01       Impact factor: 9.043

8.  zA map for sequence analysis of the Arabidopsis thaliana genome.

Authors:  M Marra; T Kucaba; M Sekhon; L Hillier; R Martienssen; A Chinwalla; J Crockett; J Fedele; H Grover; C Gund; W R McCombie; K McDonald; J McPherson; N Mudd; L Parnell; J Schein; R Seim; P Shelby; R Waterston; R Wilson
Journal:  Nat Genet       Date:  1999-07       Impact factor: 38.330

9.  Mouse molecular cytogenetic resource: 157 BACs link the chromosomal and genetic maps.

Authors:  J R Korenberg; X N Chen; K L Devon; D Noya; M L Oster-Granite; B W Birren
Journal:  Genome Res       Date:  1999-05       Impact factor: 9.043

10.  Human genome anatomy: BACs integrating the genetic and cytogenetic maps for bridging genome and biomedicine.

Authors:  J R Korenberg; X N Chen; Z Sun; Z Y Shi; S Ma; E Vataru; D Yimlamai; J S Weissenbach; H Shizuya; M I Simon; S S Gerety; H Nguyen; I S Zemsteva; L Hui; J Silva; X Wu; B W Birren; T J Hudson
Journal:  Genome Res       Date:  1999-10       Impact factor: 9.043
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  8 in total

1.  An estrogen receptor alpha activity indicator model in mice.

Authors:  Sang Jun Han; Bert W O'Malley; Francesco J DeMayo
Journal:  Genesis       Date:  2009-12       Impact factor: 2.487

2.  Genetically Engineered Mice by Pronuclear DNA microinjection.

Authors:  Janet L Demayo; Jie Wang; Dongcai Liang; Ruina Zhang; Francesco J Demayo
Journal:  Curr Protoc Mouse Biol       Date:  2012-09-01

3.  Mouse BAC ends quality assessment and sequence analyses.

Authors:  S Zhao; S Shatsman; B Ayodeji; K Geer; G Tsegaye; M Krol; E Gebregeorgis; A Shvartsbeyn; D Russell; L Overton; L Jiang; G Dimitrov; K Tran; J Shetty; J A Malek; T Feldblyum; W C Nierman; C M Fraser
Journal:  Genome Res       Date:  2001-10       Impact factor: 9.043

4.  An improved recombineering approach by adding RecA to lambda Red recombination.

Authors:  Junping Wang; Mihail Sarov; Jeanette Rientjes; Jun Fu; Heike Hollak; Harald Kranz; Wei Xie; A Francis Stewart; Youming Zhang
Journal:  Mol Biotechnol       Date:  2006-01       Impact factor: 2.695

5.  DNA modification and functional delivery into human cells using Escherichia coli DH10B.

Authors:  Kumaran Narayanan; Peter E Warburton
Journal:  Nucleic Acids Res       Date:  2003-05-01       Impact factor: 16.971

6.  Human, mouse, and rat genome large-scale rearrangements: stability versus speciation.

Authors:  Shaying Zhao; Jyoti Shetty; Lihua Hou; Arthur Delcher; Baoli Zhu; Kazutoyo Osoegawa; Pieter de Jong; William C Nierman; Robert L Strausberg; Claire M Fraser
Journal:  Genome Res       Date:  2004-09-13       Impact factor: 9.043

7.  Genome-wide end-sequenced BAC resources for the NOD/MrkTac() and NOD/ShiLtJ() mouse genomes.

Authors:  Charles A Steward; Sean Humphray; Bob Plumb; Matthew C Jones; Michael A Quail; Stephen Rice; Tony Cox; Rob Davies; James Bonfield; Thomas M Keane; Michael Nefedov; Pieter J de Jong; Paul Lyons; Linda Wicker; John Todd; Yoshihide Hayashizaki; Omid Gulban; Jayne Danska; Jen Harrow; Tim Hubbard; Jane Rogers; David J Adams
Journal:  Genomics       Date:  2009-11-10       Impact factor: 5.736

8.  End-sequencing and characterization of silkworm (Bombyx mori) bacterial artificial chromosome libraries.

Authors:  Yoshitaka Suetsugu; Hiroshi Minami; Michihiko Shimomura; Shun-ichi Sasanuma; Junko Narukawa; Kazuei Mita; Kimiko Yamamoto
Journal:  BMC Genomics       Date:  2007-09-07       Impact factor: 3.969
  8 in total

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