Literature DB >> 11112324

Use of large-scale expression cloning screens in the Xenopus laevis tadpole to identify gene function.

T C Grammer1, K J Liu, F V Mariani, R M Harland.   

Abstract

We have conducted an expression cloning screen of approximately 50, 000 cDNAs from a tadpole stage Xenopus laevis cDNA library to functionally identify genes affecting a wide range of cellular and developmental processes. Fifty-seven cDNAs were isolated for their ability to alter gross tadpole morphology or the expression patterns of tissue-specific markers. Thirty-seven of the cDNAs have not been previously described for Xenopus, and 15 of these show little or no similarity to sequences in the NCBI database. The screen and the identified genes are presented in this paper to demonstrate the power, ease, speed, and flexibility of expression cloning in the X. laevis embryo. Future screens such as this one can be done on a larger scale and will complement the sequence-based screens and genome-sequencing projects which are producing a large body of novel genes without ascribed functions. Copyright 2000 Academic Press.

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Year:  2000        PMID: 11112324     DOI: 10.1006/dbio.2000.9945

Source DB:  PubMed          Journal:  Dev Biol        ISSN: 0012-1606            Impact factor:   3.582


  15 in total

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2.  The Pax3 and Pax7 paralogs cooperate in neural and neural crest patterning using distinct molecular mechanisms, in Xenopus laevis embryos.

Authors:  Frédérique Maczkowiak; Stéphanie Matéos; Estee Wang; Daniel Roche; Richard Harland; Anne H Monsoro-Burq
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3.  Geminin cooperates with Polycomb to restrain multi-lineage commitment in the early embryo.

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4.  Nkx6 genes pattern the frog neural plate and Nkx6.1 is necessary for motoneuron axon projection.

Authors:  Darwin S Dichmann; Richard M Harland
Journal:  Dev Biol       Date:  2010-10-28       Impact factor: 3.582

5.  High-throughput functional screen of mouse gastrula cDNA libraries reveals new components of endoderm and mesoderm specification.

Authors:  Eric Chiao; Jeff Leonard; Kari Dickinson; Julie C Baker
Journal:  Genome Res       Date:  2005-01       Impact factor: 9.043

6.  The role of FGF signaling in the establishment and maintenance of mesodermal gene expression in Xenopus.

Authors:  Russell B Fletcher; Richard M Harland
Journal:  Dev Dyn       Date:  2008-05       Impact factor: 3.780

7.  The alternative splicing regulator Tra2b is required for somitogenesis and regulates splicing of an inhibitory Wnt11b isoform.

Authors:  Darwin S Dichmann; Peter Walentek; Richard M Harland
Journal:  Cell Rep       Date:  2015-01-22       Impact factor: 9.423

Review 8.  Xenopus as a model system for vertebrate heart development.

Authors:  Andrew S Warkman; Paul A Krieg
Journal:  Semin Cell Dev Biol       Date:  2006-11-24       Impact factor: 7.727

9.  Expression cloning in Xenopus identifies RNA-binding proteins as regulators of embryogenesis and Rbmx as necessary for neural and muscle development.

Authors:  Darwin S Dichmann; Russell B Fletcher; Richard M Harland
Journal:  Dev Dyn       Date:  2008-07       Impact factor: 3.780

10.  Dazap2 is required for FGF-mediated posterior neural patterning, independent of Wnt and Cdx function.

Authors:  Daniel D Roche; Karen J Liu; Richard M Harland; Anne H Monsoro-Burq
Journal:  Dev Biol       Date:  2009-06-22       Impact factor: 3.582

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