Literature DB >> 18521943

Expression cloning in Xenopus identifies RNA-binding proteins as regulators of embryogenesis and Rbmx as necessary for neural and muscle development.

Darwin S Dichmann1, Russell B Fletcher, Richard M Harland.   

Abstract

We have performed an expression cloning screen in Xenopus laevis with the aim of isolating novel gene activities from the neural plate. Of 8,064 clones screened, we isolated 61 clones that affected either neural plate patterning or tadpole morphology. Of these, 20 clones encoded RNA binding proteins, and the majority of these are heterogeneous nuclear ribonucleoproteins (hnRNPs) or SR-proteins, which are associated with alternative splicing. All of these genes are expressed in the nervous system, and in several cases specific to neural tissue. Injecting mRNA encoding these proteins results in neural plate mispatterning and abnormal muscle segmentation. To initiate characterization of these proteins, we selected Rbmx as a candidate for deeper analysis. Using morpholino mediated knockdown, we show that Rbmx is necessary for normal anterior neural plate patterning, neurogenesis, neural crest development, and muscle segmentation.

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Year:  2008        PMID: 18521943      PMCID: PMC2562419          DOI: 10.1002/dvdy.21590

Source DB:  PubMed          Journal:  Dev Dyn        ISSN: 1058-8388            Impact factor:   3.780


  47 in total

1.  Alternative splicing and genome complexity.

Authors:  David Brett; Heike Pospisil; Juan Valcárcel; Jens Reich; Peer Bork
Journal:  Nat Genet       Date:  2001-12-17       Impact factor: 38.330

Review 2.  Mechanisms of alternative pre-messenger RNA splicing.

Authors:  Douglas L Black
Journal:  Annu Rev Biochem       Date:  2003-02-27       Impact factor: 23.643

3.  Lbx1 specifies somatosensory association interneurons in the dorsal spinal cord.

Authors:  Michael K Gross; Mirella Dottori; Martyn Goulding
Journal:  Neuron       Date:  2002-05-16       Impact factor: 17.173

4.  Genome-wide survey of human alternative pre-mRNA splicing with exon junction microarrays.

Authors:  Jason M Johnson; John Castle; Philip Garrett-Engele; Zhengyan Kan; Patrick M Loerch; Christopher D Armour; Ralph Santos; Eric E Schadt; Roland Stoughton; Daniel D Shoemaker
Journal:  Science       Date:  2003-12-19       Impact factor: 47.728

5.  Gene expression in the embryonic nervous system of Xenopus laevis.

Authors:  K Richter; H Grunz; I B Dawid
Journal:  Proc Natl Acad Sci U S A       Date:  1988-11       Impact factor: 11.205

6.  Monoclonal antibodies identify blastemal cells derived from dedifferentiating limb regeneration.

Authors:  C R Kintner; J P Brockes
Journal:  Nature       Date:  1984 Mar 1-7       Impact factor: 49.962

7.  Isolation and characterization of a Xenopus gene (XMLP) encoding a MARCKS-like protein.

Authors:  H Zhao; Y Cao; H Grunz
Journal:  Int J Dev Biol       Date:  2001-10       Impact factor: 2.203

8.  The planar polarity gene strabismus regulates convergent extension movements in Xenopus.

Authors:  Rachel S Darken; Adriane M Scola; Andrew S Rakeman; Gishnu Das; Marek Mlodzik; Paul A Wilson
Journal:  EMBO J       Date:  2002-03-01       Impact factor: 11.598

9.  Translocation of a localized maternal mRNA to the vegetal pole of Xenopus oocytes.

Authors:  D A Melton
Journal:  Nature       Date:  1987 Jul 2-8       Impact factor: 49.962

10.  The role of localization of bicoid RNA in organizing the anterior pattern of the Drosophila embryo.

Authors:  T Berleth; M Burri; G Thoma; D Bopp; S Richstein; G Frigerio; M Noll; C Nüsslein-Volhard
Journal:  EMBO J       Date:  1988-06       Impact factor: 11.598

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  18 in total

1.  Regulation of Co-transcriptional Pre-mRNA Splicing by m6A through the Low-Complexity Protein hnRNPG.

Authors:  Katherine I Zhou; Hailing Shi; Ruitu Lyu; Adam C Wylder; Żaneta Matuszek; Jessica N Pan; Chuan He; Marc Parisien; Tao Pan
Journal:  Mol Cell       Date:  2019-08-21       Impact factor: 17.970

2.  The alternative splicing regulator Tra2b is required for somitogenesis and regulates splicing of an inhibitory Wnt11b isoform.

Authors:  Darwin S Dichmann; Peter Walentek; Richard M Harland
Journal:  Cell Rep       Date:  2015-01-22       Impact factor: 9.423

3.  fus/TLS orchestrates splicing of developmental regulators during gastrulation.

Authors:  Darwin S Dichmann; Richard M Harland
Journal:  Genes Dev       Date:  2012-06-15       Impact factor: 11.361

4.  RNA binding proteins accumulate at the postsynaptic density with synaptic activity.

Authors:  Guoan Zhang; Thomas A Neubert; Bryen A Jordan
Journal:  J Neurosci       Date:  2012-01-11       Impact factor: 6.167

5.  Hnrpab regulates neural development and neuron cell survival after glutamate stimulation.

Authors:  John R Sinnamon; Catherine B Waddell; Sara Nik; Emily I Chen; Kevin Czaplinski
Journal:  RNA       Date:  2012-02-13       Impact factor: 4.942

6.  Novel domains in the hnRNP G/RBMX protein with distinct roles in RNA binding and targeting nascent transcripts.

Authors:  Rasha Kanhoush; Brent Beenders; Caroline Perrin; Jacques Moreau; Michel Bellini; May Penrad-Mobayed
Journal:  Nucleus       Date:  2010 Jan-Feb       Impact factor: 4.197

Review 7.  Neural is Fundamental: Neural Stemness as the Ground State of Cell Tumorigenicity and Differentiation Potential.

Authors:  Ying Cao
Journal:  Stem Cell Rev Rep       Date:  2021-10-29       Impact factor: 5.739

Review 8.  RNA-binding proteins in eye development and disease: implication of conserved RNA granule components.

Authors:  Soma Dash; Archana D Siddam; Carrie E Barnum; Sarath Chandra Janga; Salil A Lachke
Journal:  Wiley Interdiscip Rev RNA       Date:  2016-05-01       Impact factor: 9.957

9.  DEAD-box protein Ddx46 is required for the development of the digestive organs and brain in zebrafish.

Authors:  Shunya Hozumi; Ryo Hirabayashi; Akio Yoshizawa; Mitsuko Ogata; Tohru Ishitani; Makiko Tsutsumi; Atsushi Kuroiwa; Motoyuki Itoh; Yutaka Kikuchi
Journal:  PLoS One       Date:  2012-03-19       Impact factor: 3.240

10.  Comparative functional analysis of ZFP36 genes during Xenopus development.

Authors:  Karine Tréguer; Corinne Faucheux; Philippe Veschambre; Sandrine Fédou; Nadine Thézé; Pierre Thiébaud
Journal:  PLoS One       Date:  2013-01-16       Impact factor: 3.240

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